Factsheet for Os12t0183100-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 8

Predictors

GFP

MS/MS

Papers

mitochondrion: 23257241
plastid: 23257241

mitochondrion: 19010998
mitochondrion: 23027867

gfp PMID: 23257241 doi

L Xu, C Carrie, SR Law, MW Murcha, J Whelan

Australian Research Council Centre of Excellence in Plant Energy Biology, University of Western Australia, Crawley, Western Australia 6009, Australia.

msms PMID: 23027867 doi

G Liu, H Tian, YQ Huang, J Hu, YX Ji, SQ Li, YQ Feng, L Guo, YG Zhu

State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan 430072, China.

msms PMID: 19010998 doi

S Huang, NL Taylor, R Narsai, H Eubel, J Whelan, AH Millar

Australian Research Council Centre of Excellence in Plant Energy Biology, M316, University of Western Australia, Crawley, 6009 Western Australia, Australia.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G121400.3	Wheat	mitochondrion	80.86	83.8
TraesCS4B01G071500.1	Wheat	mitochondrion	80.04	83.48
TraesCS5D01G126700.1	Wheat	mitochondrion	80.25	83.16
Zm00001d023694_P001	Maize	mitochondrion	83.33	82.99
TraesCS5A01G120000.3	Wheat	mitochondrion	79.63	82.52
HORVU5Hr1G034820.3	Barley	mitochondrion	78.6	81.45
KXG23145	Sorghum	mitochondrion	82.92	79.64
GSMUA_Achr3P18980_001	Banana	mitochondrion	70.99	75.0
Solyc06g059850.1.1	Tomato	cytosol	57.41	73.42
VIT_18s0001g14980.t01	Wine grape	plastid	63.17	65.18
VIT_04s0044g01490.t01	Wine grape	mitochondrion	63.17	63.83
CDX81122	Canola	plastid	61.11	63.6
KRG99480	Soybean	cytosol	26.54	63.55
Bra006017.1-P	Field mustard	plastid	61.11	63.46
AT5G09300.1	Thale cress	plastid	61.32	63.14
CDX78354	Canola	plastid	61.32	63.14
KRH53908	Soybean	cytosol	15.43	62.5
CDY65512	Canola	mitochondrion	60.49	62.29
KRH64030	Soybean	mitochondrion, plastid	60.7	62.24
Bra017912.1-P	Field mustard	mitochondrion	60.29	62.08
CDY50237	Canola	mitochondrion	60.29	62.08
Bra016423.1-P	Field mustard	mitochondrion	59.67	61.57
KRH64579	Soybean	endoplasmic reticulum	60.49	61.51
Solyc04g063350.2.1	Tomato	mitochondrion	59.47	61.23
KRH53343	Soybean	mitochondrion	61.32	61.19
CDX96593	Canola	mitochondrion	59.26	61.15
PGSC0003DMT400060275	Potato	mitochondrion	58.64	61.03
Solyc05g056480.2.1	Tomato	plastid	58.23	60.6
PGSC0003DMT400063962	Potato	mitochondrion, plastid	58.23	60.08
CDY65109	Canola	mitochondrion	58.44	60.04
PGSC0003DMT400012840	Potato	cytosol, mitochondrion, plasma membrane	33.33	59.34
Solyc12g055880.1.1	Tomato	cytosol	16.46	59.26
PGSC0003DMT400033905	Potato	mitochondrion	55.14	58.77
Solyc06g059840.2.1	Tomato	mitochondrion	54.94	58.55
Solyc12g055890.1.1	Tomato	mitochondrion	34.98	57.24
AT1G21400.5	Thale cress	plastid	61.11	56.68
AT5G34780.1	Thale cress	cytosol, mitochondrion	31.69	42.19
Os02t0739600-01	Rice	mitochondrion	22.22	27.69
Os06t0246500-01	Rice	plastid	21.19	25.88
Os04t0119400-01	Rice	plastid	19.55	22.35
Os02t0739700-01	Rice	plastid	2.67	2.95

Protein Annotations

Gene3D:3.40.50.970	MapMan:4.2.7.2.1.1	EntrezGene:4351684	ProteinID:ABA95970.2	ProteinID:ABA95971.1	ProteinID:BAF29343.1
ProteinID:BAT16166.1	InterPro:DH_E1	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152
GO:GO:0016624	GO:GO:0055114	EnsemblPlantsGene:Os12g0183100	EnsemblPlants:Os12t0183100-01	PFAM:PF00676	PANTHER:PTHR43380
PANTHER:PTHR43380:SF2	UniProt:Q2QWT8	SUPFAM:SSF52518	InterPro:THDP-binding	UniParc:UPI0000681915	RefSeq:XP_015619958.1
RefSeq:XP_015619959.1	SEG:seg	:	:	:	:

Description

Similar to Branched chain alpha-keto acid dehydrogenase E1-alpha subunit (Fragment). (Os12t0183100-01);Similar to Branched-chain alpha keto-acid dehydrogenase E1 alpha subunit-like protein. (Os12t0183100-02);Similar to Branched-chain alpha keto-acid dehydrogenase E1 alpha subunit-like protein. (Os12t0183100-03)

Coordinates

chr12:+:4209290..4213068

Molecular Weight (calculated)

54044.9 Da

IEP (calculated)

6.789

GRAVY (calculated)

-0.367

Length

486 amino acids

Sequence
(BLAST)

001: MAPWRAAAMA SSQLARRAAR RLLSSQHRRH CAAPACPWLL GSAPPVLAPS PVAAAAAGDR RGFCSVRRFT GESNAAAAVE EAENGLVAGG DQAIDFPGGK
101: VSFVAEMNFL PESQRDRINC YRVLDDDGRT ISGSRFQEVS KELALKMYNE MATLQVMDTI FFEAQRQGRI SFYLTSHGEE AINIASAAAL TIDDIVLPQY
201: REPGVLLWRG FTLQEFANQC FGNKLDYGKG RQMPIHYGSN RLNYFTVSSP IATQLPHAVG AAYSLKMDKK DACAITYFGD GGTSEGDFHA ALNFAAVMEA
301: PVIFFCRNNG WAISTPTSEQ FRSDGAVIRG QAYGMRSIRV DGNDALAVYS AVHTAREMAI KEGRPILVEA LTYRVGHHST SDDSTKYRPV DEIEHWRTAR
401: DPISRYRKWV QGNGWWCDED ESELRNNVRQ ELLKAIQVAE RMPKPPLAEL FTDVYDEVPS NLREQERLLR DTIKKHPADY PADVHI

Best Arabidopsis Sequence Match ( AT5G09300.1 )
(BLAST)

001: MALHLRSSFS SKSTLLNILR HNLGFGSRSH VTRHIRQILP HDPPLRGSQN PISRLCNTMA EPETLSSFVQ HEYANNHQVM DFPGGKVAFT PEIQFISESD
101: KERVPCYRVL DDNGQLITNS QFVQVSEEVA VKIYSDMVTL QIMDNIFYEA QRQGRLSFYA TAIGEEAINI ASAAALTPQD VIFPQYREPG VLLWRGFTLQ
201: EFANQCFGNK SDYGKGRQMP VHYGSNKLNY FTVSATIATQ LPNAVGAAYS LKMDKKDACA VTYFGDGGTS EGDFHAALNI AAVMEAPVLF ICRNNGWAIS
301: TPTSDQFRSD GVVVKGRAYG IRSIRVDGND ALAMYSAVHT AREMAIREQR PILIEALTYR VGHHSTSDDS TRYRSAGEIE WWNKARNPLS RFRTWIESNG
401: WWSDKTESDL RSRIKKEMLE ALRVAEKTEK PNLQNMFSDV YDVPPSNLRE QELLVRQTIN SHPQDYPSDV PL

Arabidopsis Description

2-oxoisovalerate dehydrogenase subunit alpha 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q84JL2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.