CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 6
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d023694_P001	Maize	mitochondrion	88.93	92.21
Os12t0183100-01	Rice	mitochondrion	79.64	82.92
TraesCS5D01G126700.1	Wheat	mitochondrion	76.28	82.3
TraesCS5B01G121400.3	Wheat	mitochondrion	76.09	82.09
TraesCS4B01G071500.1	Wheat	mitochondrion	75.49	81.97
TraesCS5A01G120000.3	Wheat	mitochondrion	75.89	81.88
HORVU5Hr1G034820.3	Barley	mitochondrion	74.31	80.17
Solyc06g059850.1.1	Tomato	cytosol	56.52	75.26
GSMUA_Achr3P18980_001	Banana	mitochondrion	67.98	74.78
VIT_18s0001g14980.t01	Wine grape	plastid	61.26	65.82
VIT_04s0044g01490.t01	Wine grape	mitochondrion	61.66	64.86
CDX81122	Canola	plastid	59.29	64.24
AT5G09300.1	Thale cress	plastid	59.88	64.19
Bra006017.1-P	Field mustard	plastid	59.09	63.89
CDX78354	Canola	plastid	59.29	63.56
KRG99480	Soybean	cytosol	25.3	63.05
KRH64579	Soybean	endoplasmic reticulum	58.89	62.34
KRH64030	Soybean	mitochondrion, plastid	57.71	61.6
PGSC0003DMT400060275	Potato	mitochondrion	56.72	61.46
Solyc05g056480.2.1	Tomato	plastid	56.52	61.24
Solyc04g063350.2.1	Tomato	mitochondrion	57.11	61.23
KRH53343	Soybean	mitochondrion	58.7	60.99
Solyc12g055880.1.1	Tomato	cytosol	16.21	60.74
CDY65512	Canola	mitochondrion	56.52	60.59
Bra017912.1-P	Field mustard	mitochondrion	56.32	60.38
CDY50237	Canola	mitochondrion	56.32	60.38
PGSC0003DMT400063962	Potato	mitochondrion, plastid	55.93	60.08
Bra016423.1-P	Field mustard	mitochondrion	55.93	60.08
KRH53908	Soybean	cytosol	14.23	60.0
CDX96593	Canola	mitochondrion	55.53	59.66
PGSC0003DMT400033905	Potato	mitochondrion	53.75	59.65
Solyc06g059840.2.1	Tomato	mitochondrion	53.75	59.65
PGSC0003DMT400012840	Potato	cytosol, mitochondrion, plasma membrane	32.02	59.34
CDY65109	Canola	mitochondrion	54.55	58.35
Solyc12g055890.1.1	Tomato	mitochondrion	33.4	56.9
AT1G21400.5	Thale cress	plastid	57.31	55.34
AT5G34780.1	Thale cress	cytosol, mitochondrion	30.04	41.64
EES05555	Sorghum	mitochondrion	21.74	28.21
EER88157	Sorghum	mitochondrion	20.36	26.08
EES10385	Sorghum	plastid	19.76	23.2

Protein Annotations

EnsemblPlants:KXG23145	EnsemblPlantsGene:SORBI_3008G062200	Gene3D:3.40.50.970	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016624	GO:GO:0055114	InterPro:DH_E1	InterPro:THDP-binding	PANTHER:PTHR43380
PANTHER:PTHR43380:SF2	PFAM:PF00676	ProteinID:KXG23145	ProteinID:KXG23145.1	SEG:seg	SUPFAM:SSF52518
UniParc:UPI0001C80973	UniProt:A0A1B6PCB8	MapMan:4.2.7.2.1.1	:	:	:

Description

hypothetical protein

Coordinates

chr8:+:6609288..6612808

Molecular Weight (calculated)

56251.4 Da

IEP (calculated)

6.385

GRAVY (calculated)

-0.354

Length

506 amino acids

Sequence
(BLAST)

001: MPACHHWRGL ELGRAEHGVS DMAALWLSRA STQLARRAAR RLPAGRGSGE PTTSPWFLGA VPPPALGSTA AVETSRRRGF CSVRRFAGES SAAAATVVDE
101: EPENGFVASD QQAVHFPGGK VSFVAEMNFL PDSMKERINC YRVLDDDGRT ISGSRFQEVS KELAVKMYSE MVTLQIMDTI FYEAQRQGRI SFYLTSNGEE
201: AINIASAAAL SMDDIVLPQY REPGVLLWRG FTLQEFANQC FGNKLDYGKG RQMPIHYGSN RLNYFTVSSP IATQLPHAVG AAYSLKMDKK DACAITYFGD
301: GGTSEGDFHA ALNFAAVMEA PVIFFCRNNG WAISTPTTEQ FRSDGVVIRG QAYGIRGIRV DGNDALAVYS AVHAAREMAI TEGRPILVEA LTYRVGHHST
401: SDDSTKYRPV DEIEHWRTAR DPISRYRKWV QGNDWWSDAE ESELRSRVRK ELLQAIQVAE RMPKPPVADL FTDVYDKIPS NLCEQEQLLR DTIMKHPADY
501: PTDVPV

Best Arabidopsis Sequence Match ( AT5G09300.1 )
(BLAST)

001: MALHLRSSFS SKSTLLNILR HNLGFGSRSH VTRHIRQILP HDPPLRGSQN PISRLCNTMA EPETLSSFVQ HEYANNHQVM DFPGGKVAFT PEIQFISESD
101: KERVPCYRVL DDNGQLITNS QFVQVSEEVA VKIYSDMVTL QIMDNIFYEA QRQGRLSFYA TAIGEEAINI ASAAALTPQD VIFPQYREPG VLLWRGFTLQ
201: EFANQCFGNK SDYGKGRQMP VHYGSNKLNY FTVSATIATQ LPNAVGAAYS LKMDKKDACA VTYFGDGGTS EGDFHAALNI AAVMEAPVLF ICRNNGWAIS
301: TPTSDQFRSD GVVVKGRAYG IRSIRVDGND ALAMYSAVHT AREMAIREQR PILIEALTYR VGHHSTSDDS TRYRSAGEIE WWNKARNPLS RFRTWIESNG
401: WWSDKTESDL RSRIKKEMLE ALRVAEKTEK PNLQNMFSDV YDVPPSNLRE QELLVRQTIN SHPQDYPSDV PL

Arabidopsis Description

2-oxoisovalerate dehydrogenase subunit alpha 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q84JL2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.