Factsheet for TraesCS5A01G120000.3

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G126700.1	Wheat	mitochondrion	98.51	98.51
TraesCS5B01G121400.3	Wheat	mitochondrion	98.29	98.29
TraesCS4B01G071500.1	Wheat	mitochondrion	96.8	97.42
HORVU5Hr1G034820.3	Barley	mitochondrion	94.67	94.67
Os12t0183100-01	Rice	mitochondrion	82.52	79.63
Zm00001d023694_P001	Maize	mitochondrion	81.88	78.69
KXG23145	Sorghum	mitochondrion	81.88	75.89
GSMUA_Achr3P18980_001	Banana	mitochondrion	70.79	72.17
Solyc06g059850.1.1	Tomato	cytosol	58.42	72.11
VIT_18s0001g14980.t01	Wine grape	plastid	63.11	62.84
Bra006017.1-P	Field mustard	plastid	62.69	62.82
CDX81122	Canola	plastid	62.05	62.31
AT5G09300.1	Thale cress	plastid	62.47	62.08
CDX78354	Canola	plastid	62.47	62.08
KRH53908	Soybean	cytosol	15.78	61.67
VIT_04s0044g01490.t01	Wine grape	mitochondrion	63.11	61.54
KRH64030	Soybean	mitochondrion, plastid	61.41	60.76
Solyc04g063350.2.1	Tomato	mitochondrion	60.98	60.59
KRG99480	Soybean	cytosol	26.23	60.59
PGSC0003DMT400060275	Potato	mitochondrion	59.91	60.17
CDY65512	Canola	mitochondrion	60.55	60.17
Bra017912.1-P	Field mustard	mitochondrion	60.34	59.96
CDY50237	Canola	mitochondrion	60.34	59.96
Solyc05g056480.2.1	Tomato	plastid	59.7	59.96
KRH64579	Soybean	endoplasmic reticulum	60.98	59.83
PGSC0003DMT400063962	Potato	mitochondrion, plastid	59.7	59.45
Bra016423.1-P	Field mustard	mitochondrion	59.49	59.24
CDX96593	Canola	mitochondrion	59.49	59.24
KRH53343	Soybean	mitochondrion	61.19	58.93
CDY65109	Canola	mitochondrion	59.28	58.77
PGSC0003DMT400033905	Potato	mitochondrion	57.14	58.77
Solyc06g059840.2.1	Tomato	mitochondrion	56.93	58.55
Solyc12g055890.1.1	Tomato	mitochondrion	36.67	57.91
PGSC0003DMT400012840	Potato	cytosol, mitochondrion, plasma membrane	33.26	57.14
Solyc12g055880.1.1	Tomato	cytosol	16.2	56.3
AT1G21400.5	Thale cress	plastid	62.05	55.53
AT5G34780.1	Thale cress	cytosol, mitochondrion	31.98	41.1
TraesCS6A01G311800.1	Wheat	golgi	21.11	26.68
TraesCS7A01G238900.1	Wheat	mitochondrion	21.54	25.83
TraesCS2A01G010100.1	Wheat	plastid	19.62	21.85

Protein Annotations

EnsemblPlants:TraesCS5A01G120000.3	EnsemblPlantsGene:TraesCS5A01G120000	Gene3D:3.40.50.970	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016624	InterPro:DH_E1	InterPro:THDP-binding	PANTHER:PTHR43380	PANTHER:PTHR43380:SF2
PFAM:PF00676	SEG:seg	SUPFAM:SSF52518	TIGR:cd02000	MapMan:4.2.7.2.1.1	:

Description

No Description!

Coordinates

chr5A:-:253605280..253608115

Molecular Weight (calculated)

52324.8 Da

IEP (calculated)

6.330

GRAVY (calculated)

-0.383

Length

469 amino acids

Sequence
(BLAST)

001: MAAWLARRAA RRLAGELRSR GPGPWPLSWS TVPVLGVPSG DQSRGFCSVR RFAGDSAAAA AIEEPENGLA AGDLQFVDFP GGKLSFVGEM NFLPESQMER
101: INCYRVLDDD GGTIYSSRFQ EVSKELALKM YSNMVTLQIM DTIFYEAQRQ GRISFYLTSN GEEAINIASA AALSAQDIVL PQYREPGVLL WRGFTLQEFA
201: NQLFGNKLDY GKGRQMPIHY GSNRLNYFTV SSPIATQLPQ AVGAAYSLKM DKKKACAITY FGDGGTSEGD FHAALNFAAV TEAPVIFFCR NNGWAISTPT
301: AEQFRSDGVV TRGQAYGIRS IRVDGNDTLA VYSTVHTARE MAITEGRPIL IEAMTYRVGH HSTSDDSTKY RPADEMEHWR TARDPVSRYR KWVQGNGWWC
401: DTQESELRNN VRQELLQAIQ VAERMPKHGL AELFTDVYDQ MPSNLREQER SLLDTIKKHS AEYPADVPV

Best Arabidopsis Sequence Match ( AT5G09300.1 )
(BLAST)

001: MALHLRSSFS SKSTLLNILR HNLGFGSRSH VTRHIRQILP HDPPLRGSQN PISRLCNTMA EPETLSSFVQ HEYANNHQVM DFPGGKVAFT PEIQFISESD
101: KERVPCYRVL DDNGQLITNS QFVQVSEEVA VKIYSDMVTL QIMDNIFYEA QRQGRLSFYA TAIGEEAINI ASAAALTPQD VIFPQYREPG VLLWRGFTLQ
201: EFANQCFGNK SDYGKGRQMP VHYGSNKLNY FTVSATIATQ LPNAVGAAYS LKMDKKDACA VTYFGDGGTS EGDFHAALNI AAVMEAPVLF ICRNNGWAIS
301: TPTSDQFRSD GVVVKGRAYG IRSIRVDGND ALAMYSAVHT AREMAIREQR PILIEALTYR VGHHSTSDDS TRYRSAGEIE WWNKARNPLS RFRTWIESNG
401: WWSDKTESDL RSRIKKEMLE ALRVAEKTEK PNLQNMFSDV YDVPPSNLRE QELLVRQTIN SHPQDYPSDV PL

Arabidopsis Description

2-oxoisovalerate dehydrogenase subunit alpha 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q84JL2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.