Factsheet for Bra006017.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX78354	Canola	plastid	99.15	98.31
AT5G09300.1	Thale cress	plastid	86.97	86.23
VIT_04s0044g01490.t01	Wine grape	mitochondrion	67.52	65.7
GSMUA_Achr3P18980_001	Banana	mitochondrion	63.03	64.13
PGSC0003DMT400060275	Potato	mitochondrion	63.68	63.81
KRG99480	Soybean	cytosol	27.56	63.55
Bra016423.1-P	Field mustard	mitochondrion	63.89	63.48
TraesCS4B01G071500.1	Wheat	mitochondrion	63.03	63.3
Solyc05g056480.2.1	Tomato	plastid	63.03	63.17
TraesCS5B01G121400.3	Wheat	mitochondrion	63.25	63.11
Bra017912.1-P	Field mustard	mitochondrion	63.46	62.92
TraesCS5D01G126700.1	Wheat	mitochondrion	63.03	62.9
TraesCS5A01G120000.3	Wheat	mitochondrion	62.82	62.69
HORVU5Hr1G034820.3	Barley	mitochondrion	61.97	61.83
KRH64030	Soybean	mitochondrion, plastid	62.39	61.6
Os12t0183100-01	Rice	mitochondrion	63.46	61.11
Zm00001d023694_P001	Maize	mitochondrion	63.25	60.66
KRH53908	Soybean	cytosol	15.38	60.0
KXG23145	Sorghum	mitochondrion	63.89	59.09
Bra017890.1-P	Field mustard	cytosol	4.91	25.56
Bra035416.1-P	Field mustard	mitochondrion	20.94	25.19
Bra012418.1-P	Field mustard	mitochondrion	20.73	24.49
Bra016238.1-P	Field mustard	mitochondrion	20.51	24.0
Bra024643.1-P	Field mustard	mitochondrion	19.66	23.77
Bra032619.1-P	Field mustard	plastid	20.3	22.35
Bra033286.1-P	Field mustard	plastid	20.09	22.07

Protein Annotations

Gene3D:3.40.50.970	MapMan:4.2.7.2.1.1	EnsemblPlantsGene:Bra006017	EnsemblPlants:Bra006017.1	EnsemblPlants:Bra006017.1-P	ncoils:Coil
InterPro:DH_E1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0008150	GO:GO:0008152	GO:GO:0016624	GO:GO:0055114
UniProt:M4CP79	PFAM:PF00676	PANTHER:PTHR43380	PANTHER:PTHR43380:SF2	SUPFAM:SSF52518	InterPro:THDP-binding
UniParc:UPI000253F7C2	SEG:seg	:	:	:	:

Description

AT5G09300 (E=7e-222) | 2-oxoisovalerate dehydrogenase, putative / 3-methyl-2-oxobutanoate dehydrogenase, putative / branched-chain alpha-keto acid dehydrogenase E1 alpha subunit, putative

Coordinates

chrA03:-:1637670..1639777

Molecular Weight (calculated)

52684.1 Da

IEP (calculated)

6.616

GRAVY (calculated)

-0.418

Length

468 amino acids

Sequence
(BLAST)

001: MAQHLKSSSK SILLNILRHN IGFSSPSHAS RHLRHNLPHG PLSTRLAPNL ITRYCNTMVD TLSSIGSHED TNSQVMDFPG GKLAFTPEIH FISESNEERV
101: PCYRVLDDNG QQLTNSRFIP VSKEIAVKMY SDMVTLQMMD NIFYEAQRQG RLSFYATAFG EEAINIASAA ALSPDDVIFP QYREPGVLLW RGFTLQEFAN
201: QCFGNKSDYG KGRQMPVHYG SNKLNYFTVS ATIATQLPNA VGAAYSLKMD EKDACAVTFF GDGGSSEGDF HAALNFAAVM EAPVLFICRN NGWAISTPTS
301: DQFRSDGVVV KGRAYGIRSI RVDGNDALAM YSAVHEAREM AIREHRPILI EALTYRVGHH STSDDSTRYR SADEIEWWNK ARNPLSRFRT WVESNGWWSD
401: EAESDLRSKI KKEMLEAIRV AEKTEKPNLN HMFSDVYDVP PLNLREQELL VRQAIKSHPQ DYPSDVPL

Best Arabidopsis Sequence Match ( AT5G09300.1 )
(BLAST)

001: MALHLRSSFS SKSTLLNILR HNLGFGSRSH VTRHIRQILP HDPPLRGSQN PISRLCNTMA EPETLSSFVQ HEYANNHQVM DFPGGKVAFT PEIQFISESD
101: KERVPCYRVL DDNGQLITNS QFVQVSEEVA VKIYSDMVTL QIMDNIFYEA QRQGRLSFYA TAIGEEAINI ASAAALTPQD VIFPQYREPG VLLWRGFTLQ
201: EFANQCFGNK SDYGKGRQMP VHYGSNKLNY FTVSATIATQ LPNAVGAAYS LKMDKKDACA VTYFGDGGTS EGDFHAALNI AAVMEAPVLF ICRNNGWAIS
301: TPTSDQFRSD GVVVKGRAYG IRSIRVDGND ALAMYSAVHT AREMAIREQR PILIEALTYR VGHHSTSDDS TRYRSAGEIE WWNKARNPLS RFRTWIESNG
401: WWSDKTESDL RSRIKKEMLE ALRVAEKTEK PNLQNMFSDV YDVPPSNLRE QELLVRQTIN SHPQDYPSDV PL

Arabidopsis Description

2-oxoisovalerate dehydrogenase subunit alpha 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q84JL2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.