Factsheet for VIT_04s0044g01490.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 2
mitochondrion 7

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
EpiLoc:	mitochondrion
MultiLoc:	mitochondrion
Plant-mPloc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400060275	Potato	mitochondrion	67.98	70.02
Solyc05g056480.2.1	Tomato	plastid	66.94	68.95
Bra006017.1-P	Field mustard	plastid	65.7	67.52
CDX81122	Canola	plastid	65.49	67.45
CDX78354	Canola	plastid	65.9	67.16
AT5G09300.1	Thale cress	plastid	65.49	66.74
GSMUA_Achr3P18980_001	Banana	mitochondrion	63.62	66.52
KRH64030	Soybean	mitochondrion, plastid	65.49	66.46
KRG99480	Soybean	cytosol	27.86	66.01
VIT_18s0001g14980.t01	Wine grape	plastid	63.2	64.54
Zm00001d023694_P001	Maize	mitochondrion	64.66	63.73
TraesCS4B01G071500.1	Wheat	mitochondrion	61.54	63.52
TraesCS5B01G121400.3	Wheat	mitochondrion	61.75	63.33
Os12t0183100-01	Rice	mitochondrion	63.83	63.17
TraesCS5A01G120000.3	Wheat	mitochondrion	61.54	63.11
TraesCS5D01G126700.1	Wheat	mitochondrion	61.54	63.11
HORVU5Hr1G034820.3	Barley	mitochondrion	60.91	62.47
KXG23145	Sorghum	mitochondrion	64.86	61.66
KRH53908	Soybean	cytosol	14.97	60.0
VIT_01s0026g00990.t01	Wine grape	mitochondrion, plastid	23.7	28.64
VIT_09s0018g01940.t01	Wine grape	mitochondrion, plastid	22.87	27.64
VIT_15s0048g02580.t01	Wine grape	plastid	18.5	20.55

Protein Annotations

EntrezGene:100258429	wikigene:100258429	Gene3D:3.40.50.970	MapMan:4.2.7.2.1.1	ProteinID:CBI37524	ProteinID:CBI37524.3
UniProt:D7U4C7	InterPro:DH_E1	EMBL:FN596506	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016624	GO:GO:0055114	EntrezGene:LOC100258429	wikigene:LOC100258429	PFAM:PF00676
PANTHER:PTHR43380	PANTHER:PTHR43380:SF2	SUPFAM:SSF52518	InterPro:THDP-binding	UniParc:UPI00019831B3	ArrayExpress:VIT_04s0044g01490
EnsemblPlantsGene:VIT_04s0044g01490	EnsemblPlants:VIT_04s0044g01490.t01	RefSeq:XP_002265166	RefSeq:XP_002265166.1	SEG:seg	:

Description

No Description!

Coordinates

chr4:-:23045676..23049328

Molecular Weight (calculated)

53578.7 Da

IEP (calculated)

7.065

GRAVY (calculated)

-0.289

Length

481 amino acids

Sequence
(BLAST)

001: MALPLGKSKR ILQCLKSKIC VVGLGKNSFW SGWFHHGCPS SMAPLAPTCR NPDAVLVNAA TQFATRRFES TKAEKHVDSL CDAEGNQLLD FPGGKVAFTS
101: EMRFIPESPM ERAHCYRVLD DNGQPNMSNF VQVSKEVAVK MYATMLTLQV MDTIFYEAQR QGRISFYVTS IGEEAINVAS AAALSIDDVI FPQYREPGVL
201: LWRGFTLQEF ANQCFGNKAD YGKGRQMPIH YGSNKHNYVT VSSTVATQIP QAVGAAYSLK MDGKDACTVT YFGDGGSSTG DFHAALNFAA VMEAPVIFIC
301: RNNGWAISTP VSDQFRSDGV VVRGRGYGVR SIRVDGNDAL AMYTAVHAAR KMAITEHRPI LIEALTYRAG HHSTSDDSSK YRPVSEIELW RMARDPVSRL
401: RRWIESNDWW SGEAESELRS NVRKEVLDAI QVAERVEKPP IAEIFTDVYD APPSNLCEQE KLLRETIRRY PQDYPPDVPA L

Best Arabidopsis Sequence Match ( AT5G09300.1 )
(BLAST)

001: MALHLRSSFS SKSTLLNILR HNLGFGSRSH VTRHIRQILP HDPPLRGSQN PISRLCNTMA EPETLSSFVQ HEYANNHQVM DFPGGKVAFT PEIQFISESD
101: KERVPCYRVL DDNGQLITNS QFVQVSEEVA VKIYSDMVTL QIMDNIFYEA QRQGRLSFYA TAIGEEAINI ASAAALTPQD VIFPQYREPG VLLWRGFTLQ
201: EFANQCFGNK SDYGKGRQMP VHYGSNKLNY FTVSATIATQ LPNAVGAAYS LKMDKKDACA VTYFGDGGTS EGDFHAALNI AAVMEAPVLF ICRNNGWAIS
301: TPTSDQFRSD GVVVKGRAYG IRSIRVDGND ALAMYSAVHT AREMAIREQR PILIEALTYR VGHHSTSDDS TRYRSAGEIE WWNKARNPLS RFRTWIESNG
401: WWSDKTESDL RSRIKKEMLE ALRVAEKTEK PNLQNMFSDV YDVPPSNLRE QELLVRQTIN SHPQDYPSDV PL

Arabidopsis Description

2-oxoisovalerate dehydrogenase subunit alpha 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q84JL2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.