Factsheet for TraesCS4B01G071500.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G121400.3	Wheat	mitochondrion	98.71	98.08
TraesCS5D01G126700.1	Wheat	mitochondrion	98.07	97.44
TraesCS5A01G120000.3	Wheat	mitochondrion	97.42	96.8
HORVU5Hr1G034820.3	Barley	mitochondrion	93.99	93.39
Os12t0183100-01	Rice	mitochondrion	83.48	80.04
Zm00001d023694_P001	Maize	mitochondrion	82.4	78.69
KXG23145	Sorghum	mitochondrion	81.97	75.49
Solyc06g059850.1.1	Tomato	cytosol	58.8	72.11
GSMUA_Achr3P18980_001	Banana	mitochondrion	70.39	71.3
Bra006017.1-P	Field mustard	plastid	63.3	63.03
VIT_18s0001g14980.t01	Wine grape	plastid	63.52	62.84
AT5G09300.1	Thale cress	plastid	63.3	62.5
KRH53908	Soybean	cytosol	16.09	62.5
CDX81122	Canola	plastid	62.45	62.31
CDX78354	Canola	plastid	63.09	62.29
VIT_04s0044g01490.t01	Wine grape	mitochondrion	63.52	61.54
KRG99480	Soybean	cytosol	26.61	61.08
Solyc04g063350.2.1	Tomato	mitochondrion	61.8	61.02
KRH64030	Soybean	mitochondrion, plastid	61.8	60.76
PGSC0003DMT400060275	Potato	mitochondrion	60.52	60.39
CDY65512	Canola	mitochondrion	61.16	60.38
KRH64579	Soybean	endoplasmic reticulum	61.8	60.25
Bra017912.1-P	Field mustard	mitochondrion	60.94	60.17
CDY50237	Canola	mitochondrion	60.94	60.17
Solyc05g056480.2.1	Tomato	plastid	60.09	59.96
PGSC0003DMT400063962	Potato	mitochondrion, plastid	60.52	59.87
Bra016423.1-P	Field mustard	mitochondrion	60.09	59.45
CDX96593	Canola	mitochondrion	60.09	59.45
KRH53343	Soybean	mitochondrion	62.02	59.34
CDY65109	Canola	mitochondrion	59.87	58.99
PGSC0003DMT400033905	Potato	mitochondrion	57.51	58.77
Solyc06g059840.2.1	Tomato	mitochondrion	57.3	58.55
Solyc12g055880.1.1	Tomato	cytosol	16.74	57.78
Solyc12g055890.1.1	Tomato	mitochondrion	36.7	57.58
PGSC0003DMT400012840	Potato	cytosol, mitochondrion, plasma membrane	33.69	57.51
AT1G21400.5	Thale cress	plastid	62.23	55.34
AT5G34780.1	Thale cress	cytosol, mitochondrion	32.83	41.92
TraesCS6B01G342000.1	Wheat	mitochondrion	22.1	26.55
TraesCS7B01G103800.2	Wheat	mitochondrion	18.88	24.31
TraesCS2B01G012500.1	Wheat	plastid	19.53	21.62

Protein Annotations

EnsemblPlants:TraesCS4B01G071500.1	EnsemblPlantsGene:TraesCS4B01G071500	Gene3D:3.40.50.970	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016624	InterPro:DH_E1	InterPro:THDP-binding	PANTHER:PTHR43380	PANTHER:PTHR43380:SF2
PFAM:PF00676	SEG:seg	SUPFAM:SSF52518	TIGR:cd02000	MapMan:4.2.7.2.1.1	:

Description

No Description!

Coordinates

chr4B:+:66103294..66105951

Molecular Weight (calculated)

52185.6 Da

IEP (calculated)

6.434

GRAVY (calculated)

-0.401

Length

466 amino acids

Sequence
(BLAST)

001: MAVWLARRAV RRLASELRSH GPWPWPLSSS TVPVLGVPSG DQSRGFCSVR RFAGDSAAVE EPENGLAAGD LQFVDFPGGK LSFVGEMNFL PESQRERINC
101: YRILDDDGGT IYSSRFQEVS KELALKMYSN MVTLQIMDTI FYEAQRQGRI SFYLTSNGEE AINIASAAAL SAQDIVLPQY REPGVLLWRG FTLQEFANQL
201: FGNKLDYGKG RQMPIHYGSN RLNYFTVSSP IATQLPQAVG AAYSLKMDKK KACAITYFGD GGTSEGDFHA ALNFAAVTEA PVIFFCRNNG WAISTPTAEQ
301: FRSDGVVTRG QAYGIRSIRV DGNDTLAVYS AVHTAREMAI TEGRPILIEA MTYRVGHHST SDDSTKYRPA DEMEHWRTAR DPVSRYRKWV QGNGWWCDTQ
401: ESELRNNVRQ ELLQAIQVAE RMPKHGLAEL FTDVYDQMPS NLREQERSLL DTIKKHPAEY PADVPA

Best Arabidopsis Sequence Match ( AT5G09300.1 )
(BLAST)

001: MALHLRSSFS SKSTLLNILR HNLGFGSRSH VTRHIRQILP HDPPLRGSQN PISRLCNTMA EPETLSSFVQ HEYANNHQVM DFPGGKVAFT PEIQFISESD
101: KERVPCYRVL DDNGQLITNS QFVQVSEEVA VKIYSDMVTL QIMDNIFYEA QRQGRLSFYA TAIGEEAINI ASAAALTPQD VIFPQYREPG VLLWRGFTLQ
201: EFANQCFGNK SDYGKGRQMP VHYGSNKLNY FTVSATIATQ LPNAVGAAYS LKMDKKDACA VTYFGDGGTS EGDFHAALNI AAVMEAPVLF ICRNNGWAIS
301: TPTSDQFRSD GVVVKGRAYG IRSIRVDGND ALAMYSAVHT AREMAIREQR PILIEALTYR VGHHSTSDDS TRYRSAGEIE WWNKARNPLS RFRTWIESNG
401: WWSDKTESDL RSRIKKEMLE ALRVAEKTEK PNLQNMFSDV YDVPPSNLRE QELLVRQTIN SHPQDYPSDV PL

Arabidopsis Description

2-oxoisovalerate dehydrogenase subunit alpha 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q84JL2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.