Factsheet for AT5G34780.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc12g055880.1.1	Tomato	cytosol	18.9	51.11
Bra016423.1-P	Field mustard	mitochondrion	57.53	44.59
CDX96593	Canola	mitochondrion	56.99	44.16
CDY65109	Canola	mitochondrion	56.99	43.97
AT1G21400.5	Thale cress	plastid	59.45	41.41
PGSC0003DMT400012840	Potato	cytosol, mitochondrion, plasma membrane	30.14	40.29
Solyc06g059850.1.1	Tomato	cytosol	38.63	37.11
VIT_18s0001g14980.t01	Wine grape	plastid	44.38	34.39
GSMUA_Achr3P18980_001	Banana	mitochondrion	43.01	34.13
KRH64579	Soybean	endoplasmic reticulum	44.11	33.68
KRH53343	Soybean	mitochondrion	44.93	33.68
TraesCS4B01G071500.1	Wheat	mitochondrion	41.92	32.83
TraesCS5B01G121400.3	Wheat	mitochondrion	41.92	32.62
AT5G09300.1	Thale cress	plastid	41.64	32.2
TraesCS5D01G126700.1	Wheat	mitochondrion	41.37	32.2
PGSC0003DMT400063962	Potato	mitochondrion, plastid	41.37	32.06
TraesCS5A01G120000.3	Wheat	mitochondrion	41.1	31.98
PGSC0003DMT400033905	Potato	mitochondrion	39.73	31.8
Os12t0183100-01	Rice	mitochondrion	42.19	31.69
Zm00001d023694_P001	Maize	mitochondrion	41.92	31.35
HORVU5Hr1G034820.3	Barley	mitochondrion	40.27	31.34
Solyc04g063350.2.1	Tomato	mitochondrion	40.0	30.93
Solyc06g059840.2.1	Tomato	mitochondrion	38.63	30.92
KXG23145	Sorghum	mitochondrion	41.64	30.04
AT1G24180.1	Thale cress	mitochondrion	16.16	15.01
AT1G59900.1	Thale cress	mitochondrion	15.89	14.91
Solyc12g055890.1.1	Tomato	mitochondrion	11.78	14.48
AT1G01090.1	Thale cress	plastid	15.07	12.85

Protein Annotations

Gene3D:3.40.50.970	MapMan:50.1.2	EntrezGene:833376	EMBL:AC019012	ProteinID:AED93907.1	ArrayExpress:AT5G34780
EnsemblPlantsGene:AT5G34780	RefSeq:AT5G34780	TAIR:AT5G34780	RefSeq:AT5G34780-TAIR-G	EnsemblPlants:AT5G34780.1	TAIR:AT5G34780.1
Unigene:At.55119	ncoils:Coil	InterPro:DH_E1	UniProt:F4KIN4	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0008677	GO:GO:0009058	GO:GO:0009987	GO:GO:0015940
GO:GO:0016491	GO:GO:0016624	GO:GO:0055114	RefSeq:NP_198327.1	PFAM:PF00676	PANTHER:PTHR43380
SUPFAM:SSF52518	InterPro:THDP-binding	UniParc:UPI00001626E7	SEG:seg	:	:

Description

KPRPutative 2-dehydropantoate 2-reductase [Source:UniProtKB/Swiss-Prot;Acc:F4KIN4]

Coordinates

chr5:-:12961682..12963892

Molecular Weight (calculated)

41603.8 Da

IEP (calculated)

6.280

GRAVY (calculated)

-0.403

Length

365 amino acids

Sequence
(BLAST)

001: MESRCKKGYF RLAVIGLSKA KDCWEKNACA VTFIGDGGTS EGDFHAGLNF AAVMEAPVVF ICRNNGWAIS THISEQFRSD GIVVKGQAYG IRSIRVDGND
101: ALAVYSAVCS AREMAVTEQR PVLIEMMIYR VGHHSTSDDS TKYRAADEIQ YWKMSRNSVN RFRKSVEDNG WWSEEDESKL RSNARKQLLQ AIQAAEKWEK
201: QPLTELFNDV YDVKPKNLEE EELGLKELIE KQPQDYMMLK ELIPNWILGI GTLALRYDFQ ETLFNGWHAI AELQQLKLKI KLNSLLNDQA DTESLKAARN
301: SALNVIQAMI IHLVLTLKGR FSLPLTEETV RFNEPIQLNQ NMVKDGGYTA ELFPIRKEEQ GEVRR

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.