Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY37427 | Canola | cytosol, mitochondrion, plastid | 34.81 | 96.75 |
| CDY37428 | Canola | cytosol | 32.71 | 95.24 |
| CDY37473 | Canola | plastid | 92.52 | 93.62 |
| CDY32445 | Canola | plastid | 92.76 | 93.41 |
| Bra032619.1-P | Field mustard | plastid | 92.76 | 93.41 |
| Bra033286.1-P | Field mustard | plastid | 92.76 | 93.19 |
| CDX90009 | Canola | plastid | 92.76 | 93.19 |
| HORVU2Hr1G086290.1 | Barley | extracellular, vacuole | 22.2 | 92.23 |
| CDY15202 | Canola | plastid | 92.06 | 91.84 |
| PGSC0003DMT400035288 | Potato | plastid | 81.31 | 79.63 |
| VIT_15s0048g02580.t01 | Wine grape | plastid | 80.14 | 79.21 |
| KRH68960 | Soybean | plastid | 77.34 | 79.19 |
| KRH47800 | Soybean | plastid | 78.97 | 78.24 |
| KRG97240 | Soybean | plastid | 77.8 | 77.99 |
| KRH06359 | Soybean | nucleus | 78.5 | 77.78 |
| Solyc12g009410.1.1 | Tomato | plastid | 79.67 | 77.5 |
| PGSC0003DMT400007571 | Potato | plastid | 79.44 | 77.27 |
| Solyc12g009400.1.1 | Tomato | plastid | 79.21 | 77.05 |
| TraesCS2D01G010700.1 | Wheat | golgi | 74.3 | 75.71 |
| TraesCS2B01G012500.1 | Wheat | plastid | 74.3 | 75.53 |
| TraesCS2A01G010100.1 | Wheat | plastid | 74.07 | 75.3 |
| Os04t0119400-01 | Rice | plastid | 73.6 | 74.12 |
| Zm00001d004473_P001 | Maize | plastid | 73.6 | 73.6 |
| GSMUA_Achr11P... | Banana | plastid | 73.83 | 73.49 |
| EES10385 | Sorghum | plastid | 73.6 | 73.09 |
| Solyc07g042920.1.1 | Tomato | cytosol, mitochondrion, plastid | 48.13 | 72.28 |
| HORVU2Hr1G001600.1 | Barley | plastid | 73.6 | 68.93 |
| AT1G59900.1 | Thale cress | mitochondrion | 33.64 | 37.02 |
| AT1G24180.1 | Thale cress | mitochondrion | 32.71 | 35.62 |
| GSMUA_Achr5P18750_001 | Banana | plastid | 67.99 | 32.26 |
| AT5G09300.1 | Thale cress | plastid | 21.73 | 19.7 |
| AT1G21400.5 | Thale cress | plastid | 21.5 | 17.56 |
| AT5G34780.1 | Thale cress | cytosol, mitochondrion | 12.85 | 15.07 |
Protein Annotations
| KEGG:00010+1.2.4.1 | KEGG:00020+1.2.4.1 | KEGG:00620+1.2.4.1 | Gene3D:3.40.50.970 | MapMan:5.1.2.2.1.1 | EntrezGene:839429 |
| UniProt:A0A178W8A7 | ProteinID:AAF26472.1 | ProteinID:AEE27233.1 | EMBL:AK226909 | ArrayExpress:AT1G01090 | EnsemblPlantsGene:AT1G01090 |
| RefSeq:AT1G01090 | TAIR:AT1G01090 | RefSeq:AT1G01090-TAIR-G | EnsemblPlants:AT1G01090.1 | TAIR:AT1G01090.1 | EMBL:AY052721 |
| EMBL:AY063724 | ncoils:Coil | InterPro:DH_E1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004739 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005975 | GO:GO:0006086 |
| GO:GO:0006091 | GO:GO:0006096 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 |
| GO:GO:0009058 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009570 | GO:GO:0009941 | GO:GO:0009987 |
| GO:GO:0016491 | GO:GO:0016624 | GO:GO:0043231 | GO:GO:0055114 | RefSeq:NP_171617.1 | UniProt:O24457 |
| ProteinID:OAP14314.1 | Symbol:PDH-E1 ALPHA | PFAM:PF00676 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009001 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 |
| PO:PO:0025281 | PANTHER:PTHR11516 | PANTHER:PTHR11516:SF25 | InterPro:Pyrv_DH_E1_asu_subgrp-y | SUPFAM:SSF52518 | InterPro:THDP-binding |
| TIGRFAMs:TIGR03182 | EMBL:U80185 | UniParc:UPI00000A852C | SEG:seg | : | : |
Description
PDH-E1 ALPHAPyruvate dehydrogenase E1 component subunit alpha [Source:UniProtKB/TrEMBL;Acc:A0A178W8A7]
Coordinates
chr1:-:47234..49304
Molecular Weight (calculated)
47176.6 Da
IEP (calculated)
7.545
GRAVY (calculated)
-0.269
Length
428 amino acids
Sequence
(BLAST)
(BLAST)
001: MATAFAPTKL TATVPLHGSH ENRLLLPIRL APPSSFLGST RSLSLRRLNH SNATRRSPVV SVQEVVKEKQ STNNTSLLIT KEEGLELYED MILGRSFEDM
101: CAQMYYRGKM FGFVHLYNGQ EAVSTGFIKL LTKSDSVVST YRDHVHALSK GVSARAVMSE LFGKVTGCCR GQGGSMHMFS KEHNMLGGFA FIGEGIPVAT
201: GAAFSSKYRR EVLKQDCDDV TVAFFGDGTC NNGQFFECLN MAALYKLPII FVVENNLWAI GMSHLRATSD PEIWKKGPAF GMPGVHVDGM DVLKVREVAK
301: EAVTRARRGE GPTLVECETY RFRGHSLADP DELRDAAEKA KYAARDPIAA LKKYLIENKL AKEAELKSIE KKIDELVEEA VEFADASPQP GRSQLLENVF
401: ADPKGFGIGP DGRYRCEDPK FTEGTAQV
101: CAQMYYRGKM FGFVHLYNGQ EAVSTGFIKL LTKSDSVVST YRDHVHALSK GVSARAVMSE LFGKVTGCCR GQGGSMHMFS KEHNMLGGFA FIGEGIPVAT
201: GAAFSSKYRR EVLKQDCDDV TVAFFGDGTC NNGQFFECLN MAALYKLPII FVVENNLWAI GMSHLRATSD PEIWKKGPAF GMPGVHVDGM DVLKVREVAK
301: EAVTRARRGE GPTLVECETY RFRGHSLADP DELRDAAEKA KYAARDPIAA LKKYLIENKL AKEAELKSIE KKIDELVEEA VEFADASPQP GRSQLLENVF
401: ADPKGFGIGP DGRYRCEDPK FTEGTAQV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.