Factsheet for Bra033286.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra022529.1-P
Bra022757.1-P
Bra026451.1-P
Bra035715.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G01090.1	Bra022529.1-P	AT5G50850.1	21798944
AT1G01090.1	Bra022757.1-P	AT5G50850.1	21798944
AT1G01090.1	Bra026451.1-P	AT5G50850.1	21798944
AT1G01090.1	Bra035715.1-P	AT5G50850.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX90009	Canola	plastid	99.77	99.77
CDY15202	Canola	plastid	98.83	98.14
Bra032619.1-P	Field mustard	plastid	95.77	96.0
AT1G01090.1	Thale cress	plastid	93.19	92.76
HORVU2Hr1G086290.1	Barley	extracellular, vacuole	22.3	92.23
PGSC0003DMT400035288	Potato	plastid	82.16	80.09
VIT_15s0048g02580.t01	Wine grape	plastid	80.52	79.21
KRH68960	Soybean	plastid	77.0	78.47
KRH47800	Soybean	plastid	79.11	78.01
KRH06359	Soybean	nucleus	79.11	78.01
KRG97240	Soybean	plastid	77.46	77.28
Solyc12g009410.1.1	Tomato	plastid	79.11	76.59
PGSC0003DMT400007571	Potato	plastid	78.87	76.36
Solyc12g009400.1.1	Tomato	plastid	78.64	76.14
TraesCS2D01G010700.1	Wheat	golgi	74.88	75.95
TraesCS2B01G012500.1	Wheat	plastid	74.65	75.53
TraesCS2A01G010100.1	Wheat	plastid	74.41	75.3
Os04t0119400-01	Rice	plastid	73.71	73.88
Zm00001d004473_P001	Maize	plastid	73.71	73.36
Solyc07g042920.1.1	Tomato	cytosol, mitochondrion, plastid	49.06	73.33
EES10385	Sorghum	plastid	73.94	73.09
GSMUA_Achr11P...	Banana	plastid	73.0	72.33
HORVU2Hr1G001600.1	Barley	plastid	73.94	68.93
Bra035416.1-P	Field mustard	mitochondrion	32.39	35.48
Bra024643.1-P	Field mustard	mitochondrion	31.92	35.14
Bra012418.1-P	Field mustard	mitochondrion	31.92	34.34
Bra016238.1-P	Field mustard	mitochondrion	32.16	34.25
GSMUA_Achr5P18750_001	Banana	plastid	68.08	32.15
Bra017890.1-P	Field mustard	cytosol	5.63	26.67
Bra006017.1-P	Field mustard	plastid	22.07	20.09
Bra017912.1-P	Field mustard	mitochondrion	21.13	19.07
Bra016423.1-P	Field mustard	mitochondrion	20.89	18.9

Protein Annotations

KEGG:00010+1.2.4.1	KEGG:00020+1.2.4.1	KEGG:00620+1.2.4.1	Gene3D:3.40.50.970	MapMan:5.1.2.2.1.1	EnsemblPlantsGene:Bra033286
EnsemblPlants:Bra033286.1	EnsemblPlants:Bra033286.1-P	ncoils:Coil	InterPro:DH_E1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004739	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006086	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016491	GO:GO:0016624	GO:GO:0043231
GO:GO:0055114	UniProt:M4EWV1	PFAM:PF00676	PANTHER:PTHR11516	PANTHER:PTHR11516:SF25	InterPro:Pyrv_DH_E1_asu_subgrp-y
SUPFAM:SSF52518	InterPro:THDP-binding	TIGRFAMs:TIGR03182	UniParc:UPI0002545142	SEG:seg	:

Description

AT1G01090 (E=2e-213) PDH-E1 ALPHA | PDH-E1 ALPHA (PYRUVATE DEHYDROGENASE E1 ALPHA); pyruvate dehydrogenase (acetyl-transferring)

Coordinates

chrA10:-:4492855..4494389

Molecular Weight (calculated)

46951.3 Da

IEP (calculated)

7.296

GRAVY (calculated)

-0.263

Length

426 amino acids

Sequence
(BLAST)

001: MATSFSATLP LHGSQENRLL LPPIRLAPPP SSFLGSTRSL TIPSSRRLYH AHASRRSPVV GVQEVVKEKK VTNSLLITKE EGLVLYEDMI LGRSFEDMCA
101: QMYYRGKMFG FVHLYNGQEA VSTGFIKLLT QSDSVVSTYR DHVHALSKGV SARAVMSELF GKVTGCCRGQ GGSMHMFSKE HNMLGGFAFI GEGIPVATGA
201: AFTSKYKREV LKQDCDDVTV AFFGDGTCNN GQFYECLNMA ALYKLPIIFV VENNLWAIGM SHLRSTSDPE IWKKGPAFGM PGVHVDGMDV LKVREVAKEA
301: VTRARRGEGP TLVECETYRF RGHSLADPDE LRDAAEKAKY AARDPITALK KYLVENKLAN EGELKTIEKK IDELVEEAVE FADASPQPGR SQLLENVFAD
401: PKGFGIGPDG RYRCEDPKFT EGTAQV

Best Arabidopsis Sequence Match ( AT1G01090.1 )
(BLAST)

001: MATAFAPTKL TATVPLHGSH ENRLLLPIRL APPSSFLGST RSLSLRRLNH SNATRRSPVV SVQEVVKEKQ STNNTSLLIT KEEGLELYED MILGRSFEDM
101: CAQMYYRGKM FGFVHLYNGQ EAVSTGFIKL LTKSDSVVST YRDHVHALSK GVSARAVMSE LFGKVTGCCR GQGGSMHMFS KEHNMLGGFA FIGEGIPVAT
201: GAAFSSKYRR EVLKQDCDDV TVAFFGDGTC NNGQFFECLN MAALYKLPII FVVENNLWAI GMSHLRATSD PEIWKKGPAF GMPGVHVDGM DVLKVREVAK
301: EAVTRARRGE GPTLVECETY RFRGHSLADP DELRDAAEKA KYAARDPIAA LKKYLIENKL AKEAELKSIE KKIDELVEEA VEFADASPQP GRSQLLENVF
401: ADPKGFGIGP DGRYRCEDPK FTEGTAQV

Arabidopsis Description

PDH-E1 ALPHAPyruvate dehydrogenase E1 component subunit alpha [Source:UniProtKB/TrEMBL;Acc:A0A178W8A7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.