Factsheet for Bra016238.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 9
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY38784	Canola	mitochondrion	96.5	98.47
Bra024643.1-P	Field mustard	mitochondrion	82.25	85.01
Zm00001d014833_P001	Maize	cytosol, golgi	19.0	84.44
Bra012418.1-P	Field mustard	mitochondrion	82.75	83.59
Bra035416.1-P	Field mustard	mitochondrion	81.25	83.55
GSMUA_Achr1P18330_001	Banana	cytosol, mitochondrion	66.25	81.79
GSMUA_Achr7P05520_001	Banana	cytosol, mitochondrion	59.5	81.79
KRG99219	Soybean	mitochondrion	69.25	80.52
TraesCS6A01G311800.1	Wheat	golgi	74.5	80.32
KRH69435	Soybean	mitochondrion	79.25	80.05
KRH45768	Soybean	mitochondrion	78.0	79.19
KRH74712	Soybean	mitochondrion	72.25	78.96
Os02t0739600-01	Rice	mitochondrion	76.5	78.46
TraesCS6D01G291100.1	Wheat	mitochondrion	75.75	78.09
TraesCS6B01G342000.1	Wheat	mitochondrion	75.75	78.09
PGSC0003DMT400058223	Potato	mitochondrion	75.75	77.49
Solyc05g006520.2.1	Tomato	plastid	75.25	76.98
Zm00001d017985_P001	Maize	mitochondrion	74.75	76.67
EES05555	Sorghum	mitochondrion	74.5	76.41
VIT_09s0018g01940.t01	Wine grape	mitochondrion, plastid	75.25	75.63
VIT_01s0026g00990.t01	Wine grape	mitochondrion, plastid	75.25	75.63
PGSC0003DMT400004851	Potato	mitochondrion	73.25	75.52
Solyc04g005080.2.1	Tomato	mitochondrion, unclear	73.75	75.45
Zm00001d052289_P001	Maize	mitochondrion	73.5	75.38
HORVU6Hr1G076810.1	Barley	plastid	76.0	75.25
TraesCS7A01G238900.1	Wheat	mitochondrion	73.5	75.19
TraesCS7D01G199900.1	Wheat	golgi	73.75	74.87
EER88157	Sorghum	mitochondrion	73.0	73.92
Zm00001d044748_P002	Maize	mitochondrion	71.75	73.21
TraesCS7B01G103800.2	Wheat	mitochondrion	66.25	73.2
Os06t0246500-01	Rice	plastid	71.75	72.11
Bra017890.1-P	Field mustard	cytosol	16.0	71.11
Zm00001d014514_P001	Maize	cytosol, mitochondrion, plastid	23.5	68.61
KRG95283	Soybean	cytosol, mitochondrion, plastid	27.0	65.85
HORVU7Hr1G040460.4	Barley	mitochondrion	73.75	58.65
Bra032619.1-P	Field mustard	plastid	35.0	32.94
Bra033286.1-P	Field mustard	plastid	34.25	32.16
Bra016423.1-P	Field mustard	mitochondrion	25.25	21.44
Bra017912.1-P	Field mustard	mitochondrion	24.75	20.97
Bra006017.1-P	Field mustard	plastid	24.0	20.51
Solyc04g025710.1.1	Tomato	cytosol	5.25	19.44
Os02t0739700-01	Rice	plastid	3.0	2.72

Protein Annotations

EnsemblPlants:Bra016238.1	EnsemblPlants:Bra016238.1-P	EnsemblPlantsGene:Bra016238	Gene3D:3.40.50.970	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016624	GO:GO:0055114	InterPro:DH_E1	InterPro:THDP-binding
PANTHER:PTHR11516	PANTHER:PTHR11516:SF38	PFAM:PF00676	SEG:seg	SUPFAM:SSF52518	UniParc:UPI0002541924
UniProt:M4DIB1	MapMan:2.2.1.1.1	:	:	:	:

Description

AT1G24180 (E=6e-187) IAR4 | IAR4; oxidoreductase, acting on the aldehyde or oxo group of donors, disulfide as acceptor / pyruvate dehydrogenase (acetyl-transferring)

Coordinates

chrA07:+:18694210..18696608

Molecular Weight (calculated)

44102.7 Da

IEP (calculated)

7.904

GRAVY (calculated)

-0.282

Length

400 amino acids

Sequence
(BLAST)

001: MALSRLSSRS TTLLQPLATT SLLRRRHIST DTTPITVETS LPFTSHLISP PSRAVETSSQ ELLSFFRDMA LMRRMEIAAD SLYKAKLIRG FCHLYDGQEA
101: VAIGMEAAIT KRDAIITSYR DHCTFLGRGG GLFEAFSELM GRTTGCSKGK GGSMHFYKKD ASFYGGHGIV GAQAPLGCGL AFAQKYSKEE AVTFTLYGDG
201: AANQGQLFEA LNIAALWDLP AVLVCENNHY GMGTAEWRSA KSPAYFKRGD YVPGLKVDGM DALAVKQACK FAKEHALKNG PIGSNHHAFA FVFEQILEMD
301: TYRYHGHSMS DPGSTYRTRD EISGVRQVRD PIDRVRKLII AHDIATEKEL KDMEKEVRKE VDAAESPIPE PSELFSNIYV KGFGAESFGA DRKELRATLP

Best Arabidopsis Sequence Match ( AT1G24180.1 )
(BLAST)

001: MALSRLSSRS NTFLKPAITA LPSSIRRHVS TDSSPITIET AVPFTSHLCE SPSRSVETSS EEILAFFRDM ARMRRMEIAA DSLYKAKLIR GFCHLYDGQE
101: ALAVGMEAAI TKKDAIITSY RDHCTFIGRG GKLVDAFSEL MGRKTGCSHG KGGSMHFYKK DASFYGGHGI VGAQIPLGCG LAFAQKYNKD EAVTFALYGD
201: GAANQGQLFE ALNISALWDL PAILVCENNH YGMGTATWRS AKSPAYFKRG DYVPGLKVDG MDALAVKQAC KFAKEHALKN GPIILEMDTY RYHGHSMSDP
301: GSTYRTRDEI SGVRQVRDPI ERVRKLLLTH DIATEKELKD MEKEIRKEVD DAVAQAKESP IPDASELFTN MYVKDCGVES FGADRKELKV TLP

Arabidopsis Description

IAR4Pyruvate dehydrogenase E1 component subunit alpha-2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8H1Y0]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.