Factsheet for HORVU6Hr1G076810.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	mitochondrion
TargetP:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G311800.1	Wheat	golgi	91.34	99.46
TraesCS6D01G291100.1	Wheat	mitochondrion	95.05	98.97
TraesCS6B01G342000.1	Wheat	mitochondrion	95.05	98.97
Os02t0739600-01	Rice	mitochondrion	88.37	91.54
EES05555	Sorghum	mitochondrion	86.39	89.49
Zm00001d017985_P001	Maize	mitochondrion	86.14	89.23
Zm00001d052289_P001	Maize	mitochondrion	85.15	88.21
GSMUA_Achr1P18330_001	Banana	cytosol, mitochondrion	68.56	85.49
GSMUA_Achr7P05520_001	Banana	cytosol, mitochondrion	60.89	84.54
CDY31596	Canola	mitochondrion	13.86	83.58
CDY70124	Canola	cytosol	29.46	82.07
Bra035416.1-P	Field mustard	mitochondrion	77.97	80.98
CDY24500	Canola	mitochondrion	77.97	80.98
CDY33613	Canola	mitochondrion	77.72	80.72
Solyc05g006520.2.1	Tomato	plastid	77.48	80.05
PGSC0003DMT400058223	Potato	mitochondrion	77.48	80.05
KRH69435	Soybean	mitochondrion	78.22	79.8
AT1G59900.1	Thale cress	mitochondrion	76.73	79.69
KRH45768	Soybean	mitochondrion	76.73	78.68
CDY38784	Canola	mitochondrion	76.24	78.57
CDY11622	Canola	mitochondrion	75.99	78.32
CDY16236	Canola	mitochondrion	75.0	78.29
Bra024643.1-P	Field mustard	mitochondrion	74.5	77.78
PGSC0003DMT400004851	Potato	mitochondrion	74.26	77.32
Solyc04g005080.2.1	Tomato	mitochondrion, unclear	74.75	77.24
AT1G24180.1	Thale cress	mitochondrion	75.0	77.1
KRH74712	Soybean	mitochondrion	69.8	77.05
KRG99219	Soybean	mitochondrion	65.59	77.03
CDY28458	Canola	mitochondrion	74.5	76.2
Bra016238.1-P	Field mustard	mitochondrion	75.25	76.0
VIT_01s0026g00990.t01	Wine grape	mitochondrion, plastid	74.75	75.88
Bra012418.1-P	Field mustard	mitochondrion	74.26	75.76
CDY40292	Canola	mitochondrion	74.01	75.7
VIT_09s0018g01940.t01	Wine grape	mitochondrion, plastid	74.5	75.63
CDY55062	Canola	cytosol	32.18	69.15
Bra017890.1-P	Field mustard	cytosol	15.35	68.89
HORVU7Hr1G040460.4	Barley	mitochondrion	80.2	64.41
CDY14675	Canola	cytosol	69.8	64.09
CDY55064	Canola	plasma membrane	50.99	62.8
KRG95283	Soybean	cytosol, mitochondrion, plastid	24.75	60.98
HORVU2Hr1G086290.1	Barley	extracellular, vacuole	11.39	44.66
HORVU2Hr1G001600.1	Barley	plastid	35.89	31.73
HORVU5Hr1G034820.3	Barley	mitochondrion	25.99	22.39
Os02t0739700-01	Rice	plastid	2.97	2.72

Protein Annotations

KEGG:00010+1.2.4.1	KEGG:00020+1.2.4.1	KEGG:00620+1.2.4.1	MapMan:2.2.1.1.1	Gene3D:3.40.50.970	UniProt:A0A287US61
InterPro:DH_E1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004739	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0006086	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0016491	GO:GO:0016624	GO:GO:0043231	GO:GO:0055114	EnsemblPlantsGene:HORVU6Hr1G076810	EnsemblPlants:HORVU6Hr1G076810.1
PFAM:PF00676	PANTHER:PTHR11516	PANTHER:PTHR11516:SF38	InterPro:Pyrv_DH_E1_asu_subgrp-y	SUPFAM:SSF52518	InterPro:THDP-binding
TIGRFAMs:TIGR03182	UniParc:UPI000B462FDE	SEG:seg	:	:	:

Description

Pyruvate dehydrogenase E1 component subunit alpha [Source:UniProtKB/TrEMBL;Acc:A0A287US61]

Coordinates

chrchr6H:-:527209917..527213203

Molecular Weight (calculated)

43343.1 Da

IEP (calculated)

8.267

GRAVY (calculated)

-0.234

Length

404 amino acids

Sequence
(BLAST)

001: XXXXXXXXPR NPSQPAMAAA ALLRRLPAAR PPLMAAARAI SDSTAPLTIE TSMPFTAHIV DPPSRDVATT PAELVAFFHD MSLMRRMEIA ADSLYKAKLI
101: RGFCHLYDGQ EAVCAGMEAA ITRKDSIITA YRDHCIFLSR GGDLVTAFAE LMGRQVGCSR GKGGSMHFYK KDANFYGGHG IVGAQVPLGC GLAFAQKYRK
201: EDTVSFSLYG DGAANQGQLF EALNISALWK LPAILVCENN HYGMGTAEWR AAKSPSYYKR GDYVPGLKVD GMDVLAVKQA CKFAKEHAIA NGPIVLEMDT
301: YRYHGHSMSD PGSTYRTRDE ISGVRQERDP IERVRKLILA HDLATPAELK DMEKEIRKEV DAAIAKAKES PMPDASELFT NVYVKGFGVE SFGADRKELR
401: ATLP

Best Arabidopsis Sequence Match ( AT1G59900.1 )
(BLAST)

001: MALSRLSSRS NIITRPFSAA FSRLISTDTT PITIETSLPF TAHLCDPPSR SVESSSQELL DFFRTMALMR RMEIAADSLY KAKLIRGFCH LYDGQEAVAI
101: GMEAAITKKD AIITAYRDHC IFLGRGGSLH EVFSELMGRQ AGCSKGKGGS MHFYKKESSF YGGHGIVGAQ VPLGCGIAFA QKYNKEEAVT FALYGDGAAN
201: QGQLFEALNI SALWDLPAIL VCENNHYGMG TAEWRAAKSP SYYKRGDYVP GLKVDGMDAF AVKQACKFAK QHALEKGPII LEMDTYRYHG HSMSDPGSTY
301: RTRDEISGVR QERDPIERIK KLVLSHDLAT EKELKDMEKE IRKEVDDAIA KAKDCPMPEP SELFTNVYVK GFGTESFGPD RKEVKASLP

Arabidopsis Description

E1 ALPHAPyruvate dehydrogenase E1 component subunit alpha-1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P52901]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.