CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 7
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY38784	Canola	mitochondrion	99.23	99.23
CDY16236	Canola	mitochondrion	85.97	87.08
CDY31596	Canola	mitochondrion	14.8	86.57
CDY40292	Canola	mitochondrion	85.71	85.06
CDY28458	Canola	mitochondrion	85.2	84.56
Zm00001d014833_P001	Maize	cytosol, golgi	19.39	84.44
CDY33613	Canola	mitochondrion	83.16	83.8
CDY24500	Canola	mitochondrion	83.16	83.8
GSMUA_Achr7P05520_001	Banana	cytosol, mitochondrion	61.73	83.16
GSMUA_Achr1P18330_001	Banana	cytosol, mitochondrion	68.37	82.72
TraesCS6A01G311800.1	Wheat	golgi	77.04	81.4
KRH69435	Soybean	mitochondrion	81.63	80.81
CDY70124	Canola	cytosol	29.59	80.0
KRG99219	Soybean	mitochondrion	70.15	79.94
KRH74712	Soybean	mitochondrion	74.49	79.78
KRH45768	Soybean	mitochondrion	79.85	79.44
Os02t0739600-01	Rice	mitochondrion	78.57	78.97
TraesCS6B01G342000.1	Wheat	mitochondrion	78.06	78.87
TraesCS6D01G291100.1	Wheat	mitochondrion	78.06	78.87
PGSC0003DMT400058223	Potato	mitochondrion	77.55	77.75
Solyc05g006520.2.1	Tomato	plastid	77.04	77.24
Zm00001d017985_P001	Maize	mitochondrion	76.79	77.18
EES05555	Sorghum	mitochondrion	76.53	76.92
PGSC0003DMT400004851	Potato	mitochondrion	75.51	76.29
Solyc04g005080.2.1	Tomato	mitochondrion, unclear	76.02	76.21
VIT_01s0026g00990.t01	Wine grape	mitochondrion, plastid	77.3	76.13
HORVU6Hr1G076810.1	Barley	plastid	78.32	75.99
Zm00001d052289_P001	Maize	mitochondrion	75.51	75.9
VIT_09s0018g01940.t01	Wine grape	mitochondrion, plastid	77.04	75.88
TraesCS7A01G238900.1	Wheat	mitochondrion	75.51	75.7
TraesCS7D01G199900.1	Wheat	golgi	75.77	75.38
EER88157	Sorghum	mitochondrion	74.74	74.18
TraesCS7B01G103800.2	Wheat	mitochondrion	68.11	73.76
Zm00001d044748_P002	Maize	mitochondrion	73.47	73.47
Os06t0246500-01	Rice	plastid	73.47	72.36
CDY14675	Canola	cytosol	77.81	69.32
CDY55062	Canola	cytosol	32.91	68.62
Zm00001d014514_P001	Maize	cytosol, mitochondrion, plastid	23.72	67.88
CDY55064	Canola	plasma membrane	55.61	66.46
KRG95283	Soybean	cytosol, mitochondrion, plastid	27.3	65.24
HORVU7Hr1G040460.4	Barley	mitochondrion	75.77	59.05
CDY37427	Canola	cytosol, mitochondrion, plastid	15.82	40.26
CDY37428	Canola	cytosol	13.27	35.37
CDY37473	Canola	plastid	35.97	33.33
CDY32445	Canola	plastid	35.97	33.18
CDY15202	Canola	plastid	35.46	32.4
CDX90009	Canola	plastid	35.2	32.39
CDX96593	Canola	mitochondrion	25.51	21.23
CDY50237	Canola	mitochondrion	25.26	20.97
CDY65512	Canola	mitochondrion	25.26	20.97
CDY65109	Canola	mitochondrion	25.0	20.72
CDX81122	Canola	plastid	24.49	20.56
CDX78354	Canola	plastid	24.74	20.55
Solyc04g025710.1.1	Tomato	cytosol	5.36	19.44
Os02t0739700-01	Rice	plastid	2.81	2.49

Protein Annotations

KEGG:00010+1.2.4.1	KEGG:00020+1.2.4.1	KEGG:00620+1.2.4.1	MapMan:2.2.1.1.1	Gene3D:3.40.50.970	GO:A0A078FF64
UniProt:A0A078FF64	EnsemblPlants:CDY11622	ProteinID:CDY11622	ProteinID:CDY11622.1	InterPro:DH_E1	GO:GO:0003674
GO:GO:0003824	GO:GO:0004739	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006086
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016491	GO:GO:0016624
GO:GO:0043231	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00049745001	PFAM:PF00676	PANTHER:PTHR11516	PANTHER:PTHR11516:SF38
InterPro:Pyrv_DH_E1_asu_subgrp-y	SUPFAM:SSF52518	InterPro:THDP-binding	TIGRFAMs:TIGR03182	UniParc:UPI0004EE3979	SEG:seg

Description

BnaC06g31170DPyruvate dehydrogenase E1 component subunit alpha [Source:UniProtKB/TrEMBL;Acc:A0A078FF64]

Coordinates

chrLK032012:-:533610..536292

Molecular Weight (calculated)

43147.6 Da

IEP (calculated)

8.345

GRAVY (calculated)

-0.285

Length

392 amino acids

Sequence
(BLAST)

001: MALSRLSSRS TTLLQPFATT SLLRRRHIST DTTPITVETS LPFTSHLISP PSRAVETSSQ ELLSFFRDMA LMRRMEIAAD SLYKAKLIRG FCHLYDGQEA
101: VAIGMEAAIT KRDAIITSYR DHCTFLGRGG GLFEAFSELM GRTTGCSKGK GGSMHFYKKD ASFYGGHGIV GAQAPLGCGL AFAQKYSKEE AVSFTLYGDG
201: AANQGQLFEA LNIAALWDLP AVLVCENNHY GMGTAEWRSA KSPAYFKRGD YVPGLKVDGM DALAVKQACK FAKEHALKNG PIILEMDTYR YHGHSMSDPG
301: STYRTRDEIS GVRQVRDPID RVRKLIIAHD IATEKELKDM EKEVRKEVDA AVAQAKESPI PEPSELFSNI YVKGFGAESF GADRKELRAT LP

Best Arabidopsis Sequence Match ( AT1G24180.1 )
(BLAST)

001: MALSRLSSRS NTFLKPAITA LPSSIRRHVS TDSSPITIET AVPFTSHLCE SPSRSVETSS EEILAFFRDM ARMRRMEIAA DSLYKAKLIR GFCHLYDGQE
101: ALAVGMEAAI TKKDAIITSY RDHCTFIGRG GKLVDAFSEL MGRKTGCSHG KGGSMHFYKK DASFYGGHGI VGAQIPLGCG LAFAQKYNKD EAVTFALYGD
201: GAANQGQLFE ALNISALWDL PAILVCENNH YGMGTATWRS AKSPAYFKRG DYVPGLKVDG MDALAVKQAC KFAKEHALKN GPIILEMDTY RYHGHSMSDP
301: GSTYRTRDEI SGVRQVRDPI ERVRKLLLTH DIATEKELKD MEKEIRKEVD DAVAQAKESP IPDASELFTN MYVKDCGVES FGADRKELKV TLP

Arabidopsis Description

IAR4Pyruvate dehydrogenase E1 component subunit alpha-2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8H1Y0]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.