Factsheet for Zm00001d014833_P001

Subcellular Localization

min:

: max

Winner_takes_all: golgi, cytosol

Predictor Summary:

plastid 1
golgi 3
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, golgi
Any Predictor:	cytosol, plastid, secretory
iPSORT:	plastid
MultiLoc:	golgi
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY31596	Canola	mitochondrion	45.56	61.19
Zm00001d014514_P001	Maize	cytosol, mitochondrion, plastid	88.89	58.39
Bra017890.1-P	Field mustard	cytosol	44.44	44.44
GSMUA_Achr1P18330_001	Banana	cytosol, mitochondrion	87.78	24.38
GSMUA_Achr7P05520_001	Banana	cytosol, mitochondrion	74.44	23.02
KRG99219	Soybean	mitochondrion	84.44	22.09
Zm00001d052289_P001	Maize	mitochondrion	94.44	21.79
Zm00001d017985_P001	Maize	mitochondrion	94.44	21.79
KRH74712	Soybean	mitochondrion	85.56	21.04
AT1G59900.1	Thale cress	mitochondrion	86.67	20.05
KRH69435	Soybean	mitochondrion	87.78	19.95
Zm00001d044748_P002	Maize	mitochondrion	86.67	19.9
CDY16236	Canola	mitochondrion	85.56	19.9
Bra024643.1-P	Field mustard	mitochondrion	85.56	19.9
AT1G24180.1	Thale cress	mitochondrion	86.67	19.85
Bra035416.1-P	Field mustard	mitochondrion	85.56	19.79
CDY24500	Canola	mitochondrion	85.56	19.79
CDY33613	Canola	mitochondrion	85.56	19.79
VIT_09s0018g01940.t01	Wine grape	mitochondrion, plastid	86.67	19.6
KRH45768	Soybean	mitochondrion	85.56	19.54
CDY11622	Canola	mitochondrion	84.44	19.39
CDY38784	Canola	mitochondrion	84.44	19.39
VIT_01s0026g00990.t01	Wine grape	mitochondrion, plastid	85.56	19.35
CDY28458	Canola	mitochondrion	84.44	19.24
CDY40292	Canola	mitochondrion	84.44	19.24
Bra012418.1-P	Field mustard	mitochondrion	84.44	19.19
Bra016238.1-P	Field mustard	mitochondrion	84.44	19.0
CDY55064	Canola	plasma membrane	66.67	18.29
CDY14675	Canola	cytosol	84.44	17.27
CDY70124	Canola	cytosol	26.67	16.55
KRG95283	Soybean	cytosol, mitochondrion, plastid	30.0	16.46
CDY55062	Canola	cytosol	27.78	13.3
Zm00001d004473_P001	Maize	plastid	43.33	9.11
Zm00001d023694_P001	Maize	mitochondrion	31.11	5.74
Solyc04g025710.1.1	Tomato	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:Zm00001d014833_P001	EnsemblPlants:Zm00001d014833_T001	EnsemblPlantsGene:Zm00001d014833	Gene3D:3.40.50.970	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016624	GO:GO:0055114	InterPro:DH_E1	InterPro:THDP-binding
PANTHER:PTHR11516	PANTHER:PTHR11516:SF38	PFAM:PF00676	ProteinID:AQK67272.1	SUPFAM:SSF52518	UniParc:UPI0008454E96
UniProt:A0A1D6GWM7	MapMan:35.1	:	:	:	:

Description

Pyruvate dehydrogenase E1 component subunit alpha-1 mitochondrial

Coordinates

chr5:-:64777744..64778511

Molecular Weight (calculated)

9877.0 Da

IEP (calculated)

8.060

GRAVY (calculated)

0.059

Length

90 amino acids

Sequence
(BLAST)

1: MFALYGDGAA NQGQLFEALN ISALWKLLAI LVCENNHYCM GTAEWRAAKS PAYYKRGDYV HGLKVDGMDV LVVKQACKFA KDHAIANGPI

Best Arabidopsis Sequence Match ( AT1G24180.1 )
(BLAST)

001: MALSRLSSRS NTFLKPAITA LPSSIRRHVS TDSSPITIET AVPFTSHLCE SPSRSVETSS EEILAFFRDM ARMRRMEIAA DSLYKAKLIR GFCHLYDGQE
101: ALAVGMEAAI TKKDAIITSY RDHCTFIGRG GKLVDAFSEL MGRKTGCSHG KGGSMHFYKK DASFYGGHGI VGAQIPLGCG LAFAQKYNKD EAVTFALYGD
201: GAANQGQLFE ALNISALWDL PAILVCENNH YGMGTATWRS AKSPAYFKRG DYVPGLKVDG MDALAVKQAC KFAKEHALKN GPIILEMDTY RYHGHSMSDP
301: GSTYRTRDEI SGVRQVRDPI ERVRKLLLTH DIATEKELKD MEKEIRKEVD DAVAQAKESP IPDASELFTN MYVKDCGVES FGADRKELKV TLP

Arabidopsis Description

IAR4Pyruvate dehydrogenase E1 component subunit alpha-2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8H1Y0]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.