Factsheet for GSMUA_Achr7P05520_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

cytosol 3
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P20070_001	Banana	cytosol	14.78	86.0
GSMUA_Achr1P18330_001	Banana	cytosol, mitochondrion	94.5	84.88
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	85.91	83.61
CDY31596	Canola	mitochondrion	18.9	82.09
CDY70124	Canola	cytosol	40.21	80.69
Zm00001d014833_P001	Maize	cytosol, golgi	23.02	74.44
CDY55062	Canola	cytosol	43.99	68.09
TraesCS6A01G311800.1	Wheat	golgi	84.19	66.04
CDY33613	Canola	mitochondrion	87.97	65.81
Bra017890.1-P	Field mustard	cytosol	20.27	65.56
Bra035416.1-P	Field mustard	mitochondrion	87.63	65.55
CDY24500	Canola	mitochondrion	87.63	65.55
KRH74712	Soybean	mitochondrion	82.13	65.3
AT1G59900.1	Thale cress	mitochondrion	86.25	64.52
PGSC0003DMT400004851	Potato	mitochondrion	85.91	64.43
Solyc04g005080.2.1	Tomato	mitochondrion, unclear	85.91	63.94
Solyc05g006520.2.1	Tomato	plastid	85.57	63.68
KRH69435	Soybean	mitochondrion	86.6	63.64
PGSC0003DMT400058223	Potato	mitochondrion	85.22	63.43
Os02t0739600-01	Rice	mitochondrion	84.88	63.33
TraesCS6D01G291100.1	Wheat	mitochondrion	84.19	63.14
TraesCS6B01G342000.1	Wheat	mitochondrion	84.19	63.14
VIT_01s0026g00990.t01	Wine grape	mitochondrion, plastid	86.25	63.07
KRH45768	Soybean	mitochondrion	85.22	62.94
VIT_09s0018g01940.t01	Wine grape	mitochondrion, plastid	85.22	62.31
GSMUA_Achr4P20080_001	Banana	mitochondrion	36.77	62.21
EES05555	Sorghum	mitochondrion	82.82	61.79
CDY16236	Canola	mitochondrion	82.13	61.76
Bra024643.1-P	Field mustard	mitochondrion	82.13	61.76
CDY38784	Canola	mitochondrion	83.16	61.73
CDY11622	Canola	mitochondrion	83.16	61.73
Zm00001d017985_P001	Maize	mitochondrion	82.47	61.54
Zm00001d044748_P002	Maize	mitochondrion	82.82	61.48
Zm00001d052289_P001	Maize	mitochondrion	82.13	61.28
EER88157	Sorghum	mitochondrion	82.82	61.01
HORVU6Hr1G076810.1	Barley	plastid	84.54	60.89
KRG99219	Soybean	mitochondrion	71.82	60.76
AT1G24180.1	Thale cress	mitochondrion	81.79	60.56
TraesCS7A01G238900.1	Wheat	mitochondrion	81.1	60.36
TraesCS7D01G199900.1	Wheat	golgi	81.44	60.15
CDY28458	Canola	mitochondrion	81.44	60.0
CDY40292	Canola	mitochondrion	81.44	60.0
Bra012418.1-P	Field mustard	mitochondrion	81.44	59.85
Bra016238.1-P	Field mustard	mitochondrion	81.79	59.5
Os06t0246500-01	Rice	plastid	80.76	59.05
TraesCS7B01G103800.2	Wheat	mitochondrion	70.79	56.91
Zm00001d014514_P001	Maize	cytosol, mitochondrion, plastid	26.12	55.47
CDY14675	Canola	cytosol	81.1	53.64
HORVU7Hr1G040460.4	Barley	mitochondrion	81.44	47.12
CDY55064	Canola	plasma membrane	51.2	45.43
KRG95283	Soybean	cytosol, mitochondrion, plastid	24.4	43.29
GSMUA_Achr11P...	Banana	plastid	37.8	25.58
GSMUA_Achr3P18980_001	Banana	mitochondrion	29.9	18.91
Solyc04g025710.1.1	Tomato	cytosol	6.87	18.52
GSMUA_Achr5P18750_001	Banana	plastid	36.43	11.75
Os02t0739700-01	Rice	plastid	0.0	0.0

Protein Annotations

EnsemblPlants:GSMUA_Achr7P05520_001	EnsemblPlants:GSMUA_Achr7T05520_001	EnsemblPlantsGene:GSMUA_Achr7G05520_001	Gene3D:3.40.50.970	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016624	GO:GO:0055114	InterPro:DH_E1	InterPro:THDP-binding
PANTHER:PTHR11516	PANTHER:PTHR11516:SF38	PFAM:PF00676	SEG:seg	SUPFAM:SSF52518	UniParc:UPI000296A0DF
UniProt:M0TEZ2	MapMan:50.1.2	:	:	:	:

Description

Pyruvate dehydrogenase E1 component subunit alpha-1, mitochondrial [Source:GMGC_GENE;Acc:GSMUA_Achr7G05520_001]

Coordinates

chr7:-:4080971..4086071

Molecular Weight (calculated)

32319.9 Da

IEP (calculated)

7.529

GRAVY (calculated)

-0.280

Length

291 amino acids

Sequence
(BLAST)

001: MTLMRRMEIA ADSLYKSKLI RGFCHLYDGQ EAVAIGLEAA ITKKDAIITA YRDHCIFLAR GGSLVESYAE LMGRRSGCSK GKGGSMHFYK KDSGFFGGHG
101: IVGAQLFEAL NISALWDLPV ILVCENNHYG MGTAEWRAAK SPAYYKRGDY VPGLKVDGMD VLAVKQACKF AKEYALQNGP IILEMDTYRY HGHSMSDPGS
201: TYRTRDEITG VRQERDPIER IRKLILSNEV ATASDLKDIE KEVRKEVDDA IAQAKEIPMP DPSELFTNVY VKGFGAEVFG ADRKEVKAVL P

Best Arabidopsis Sequence Match ( AT1G59900.1 )
(BLAST)

001: MALSRLSSRS NIITRPFSAA FSRLISTDTT PITIETSLPF TAHLCDPPSR SVESSSQELL DFFRTMALMR RMEIAADSLY KAKLIRGFCH LYDGQEAVAI
101: GMEAAITKKD AIITAYRDHC IFLGRGGSLH EVFSELMGRQ AGCSKGKGGS MHFYKKESSF YGGHGIVGAQ VPLGCGIAFA QKYNKEEAVT FALYGDGAAN
201: QGQLFEALNI SALWDLPAIL VCENNHYGMG TAEWRAAKSP SYYKRGDYVP GLKVDGMDAF AVKQACKFAK QHALEKGPII LEMDTYRYHG HSMSDPGSTY
301: RTRDEISGVR QERDPIERIK KLVLSHDLAT EKELKDMEKE IRKEVDDAIA KAKDCPMPEP SELFTNVYVK GFGTESFGPD RKEVKASLP

Arabidopsis Description

E1 ALPHAPyruvate dehydrogenase E1 component subunit alpha-1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P52901]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.