Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 4
- cytosol 2
- extracellular 2
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr7P05520_001 | Banana | cytosol, mitochondrion | 86.0 | 14.78 |
| GSMUA_Achr10P... | Banana | cytosol, mitochondrion | 82.0 | 13.71 |
| GSMUA_Achr1P18330_001 | Banana | cytosol, mitochondrion | 88.0 | 13.58 |
| GSMUA_Achr11P... | Banana | plastid | 36.0 | 4.19 |
| GSMUA_Achr3P18980_001 | Banana | mitochondrion | 26.0 | 2.83 |
| GSMUA_Achr5P18750_001 | Banana | plastid | 36.0 | 2.0 |
| GSMUA_Achr4P20080_001 | Banana | mitochondrion | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr4P20070_001 | EnsemblPlants:GSMUA_Achr4T20070_001 | EnsemblPlantsGene:GSMUA_Achr4G20070_001 | Gene3D:3.40.50.970 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016624 | GO:GO:0055114 | InterPro:DH_E1 | InterPro:THDP-binding |
| PANTHER:PTHR11516 | PANTHER:PTHR11516:SF38 | PFAM:PF00676 | SUPFAM:SSF52518 | UniParc:UPI000294F19A | UniProt:M0SQH0 |
| MapMan:35.1 | : | : | : | : | : |
Description
Pyruvate dehydrogenase E1 component subunit alpha-1, mitochondrial [Source:GMGC_GENE;Acc:GSMUA_Achr4G20070_001]
Coordinates
chr4:+:20834479..20834631
Molecular Weight (calculated)
5554.9 Da
IEP (calculated)
8.473
GRAVY (calculated)
0.354
Length
50 amino acids
Sequence
(BLAST)
(BLAST)
1: MSVMRRMEIA ADSLYKSKLI RGFCYLYDGQ EAVAVGLEAV ITKKDVVITA
001: MALSRLSSRS NIITRPFSAA FSRLISTDTT PITIETSLPF TAHLCDPPSR SVESSSQELL DFFRTMALMR RMEIAADSLY KAKLIRGFCH LYDGQEAVAI
101: GMEAAITKKD AIITAYRDHC IFLGRGGSLH EVFSELMGRQ AGCSKGKGGS MHFYKKESSF YGGHGIVGAQ VPLGCGIAFA QKYNKEEAVT FALYGDGAAN
201: QGQLFEALNI SALWDLPAIL VCENNHYGMG TAEWRAAKSP SYYKRGDYVP GLKVDGMDAF AVKQACKFAK QHALEKGPII LEMDTYRYHG HSMSDPGSTY
301: RTRDEISGVR QERDPIERIK KLVLSHDLAT EKELKDMEKE IRKEVDDAIA KAKDCPMPEP SELFTNVYVK GFGTEVLH
101: GMEAAITKKD AIITAYRDHC IFLGRGGSLH EVFSELMGRQ AGCSKGKGGS MHFYKKESSF YGGHGIVGAQ VPLGCGIAFA QKYNKEEAVT FALYGDGAAN
201: QGQLFEALNI SALWDLPAIL VCENNHYGMG TAEWRAAKSP SYYKRGDYVP GLKVDGMDAF AVKQACKFAK QHALEKGPII LEMDTYRYHG HSMSDPGSTY
301: RTRDEISGVR QERDPIERIK KLVLSHDLAT EKELKDMEKE IRKEVDDAIA KAKDCPMPEP SELFTNVYVK GFGTEVLH
Arabidopsis Description
E1 ALPHAPyruvate dehydrogenase E1 component subunit alpha-1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P52901]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.