Factsheet for GSMUA_Achr1P18330_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

cytosol 3
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P05520_001	Banana	cytosol, mitochondrion	84.88	94.5
GSMUA_Achr4P20070_001	Banana	cytosol	13.58	88.0
Zm00001d014833_P001	Maize	cytosol, golgi	24.38	87.78
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	79.01	85.62
CDY31596	Canola	mitochondrion	16.98	82.09
CDY70124	Canola	cytosol	35.8	80.0
GSMUA_Achr4P20080_001	Banana	mitochondrion	42.28	79.65
TraesCS6A01G311800.1	Wheat	golgi	85.19	74.39
Os02t0739600-01	Rice	mitochondrion	86.73	72.05
CDY33613	Canola	mitochondrion	86.42	71.98
CDY24500	Canola	mitochondrion	86.11	71.72
Bra035416.1-P	Field mustard	mitochondrion	86.11	71.72
AT1G59900.1	Thale cress	mitochondrion	86.11	71.72
KRH69435	Soybean	mitochondrion	87.04	71.21
TraesCS6D01G291100.1	Wheat	mitochondrion	85.19	71.13
TraesCS6B01G342000.1	Wheat	mitochondrion	84.88	70.88
Solyc05g006520.2.1	Tomato	plastid	85.49	70.84
PGSC0003DMT400058223	Potato	mitochondrion	85.19	70.59
KRH45768	Soybean	mitochondrion	85.8	70.56
Zm00001d017985_P001	Maize	mitochondrion	84.57	70.26
EES05555	Sorghum	mitochondrion	84.57	70.26
Zm00001d052289_P001	Maize	mitochondrion	84.26	70.0
VIT_01s0026g00990.t01	Wine grape	mitochondrion, plastid	85.8	69.85
PGSC0003DMT400004851	Potato	mitochondrion	83.64	69.85
Solyc04g005080.2.1	Tomato	mitochondrion, unclear	84.26	69.82
KRH74712	Soybean	mitochondrion	78.7	69.67
Zm00001d044748_P002	Maize	mitochondrion	84.26	69.64
EER88157	Sorghum	mitochondrion	84.57	69.37
VIT_09s0018g01940.t01	Wine grape	mitochondrion, plastid	85.19	69.35
CDY38784	Canola	mitochondrion	83.33	68.88
TraesCS7A01G238900.1	Wheat	mitochondrion	83.02	68.8
TraesCS7D01G199900.1	Wheat	golgi	83.64	68.78
HORVU6Hr1G076810.1	Barley	plastid	85.49	68.56
CDY16236	Canola	mitochondrion	81.79	68.48
CDY11622	Canola	mitochondrion	82.72	68.37
KRG99219	Soybean	mitochondrion	72.53	68.31
Bra024643.1-P	Field mustard	mitochondrion	81.48	68.22
Zm00001d014514_P001	Maize	cytosol, mitochondrion, plastid	28.7	67.88
CDY55062	Canola	cytosol	39.2	67.55
AT1G24180.1	Thale cress	mitochondrion	81.79	67.43
Os06t0246500-01	Rice	plastid	82.41	67.09
CDY28458	Canola	mitochondrion	81.48	66.84
CDY40292	Canola	mitochondrion	81.48	66.84
Bra012418.1-P	Field mustard	mitochondrion	81.48	66.67
TraesCS7B01G103800.2	Wheat	mitochondrion	74.07	66.3
Bra016238.1-P	Field mustard	mitochondrion	81.79	66.25
Bra017890.1-P	Field mustard	cytosol	18.21	65.56
CDY14675	Canola	cytosol	80.86	59.55
KRG95283	Soybean	cytosol, mitochondrion, plastid	29.94	59.15
HORVU7Hr1G040460.4	Barley	mitochondrion	83.64	53.88
CDY55064	Canola	plasma membrane	54.01	53.35
GSMUA_Achr11P...	Banana	plastid	38.89	29.3
GSMUA_Achr3P18980_001	Banana	mitochondrion	29.63	20.87
Solyc04g025710.1.1	Tomato	cytosol	6.17	18.52
GSMUA_Achr5P18750_001	Banana	plastid	36.42	13.08
Os02t0739700-01	Rice	plastid	0.31	0.23

Protein Annotations

KEGG:00010+1.2.4.1	KEGG:00020+1.2.4.1	KEGG:00620+1.2.4.1	MapMan:2.2.1.1.1	Gene3D:3.40.50.970	InterPro:DH_E1
GO:GO:0003674	GO:GO:0003824	GO:GO:0004739	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0006086	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016491
GO:GO:0016624	GO:GO:0043231	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr1G18330_001	EnsemblPlants:GSMUA_Achr1P18330_001	EnsemblPlants:GSMUA_Achr1T18330_001
UniProt:M0S0Z1	PFAM:PF00676	PANTHER:PTHR11516	PANTHER:PTHR11516:SF38	InterPro:Pyrv_DH_E1_asu_subgrp-y	SUPFAM:SSF52518
InterPro:THDP-binding	TIGRFAMs:TIGR03182	UniParc:UPI000296DE4A	:	:	:

Description

Pyruvate dehydrogenase E1 component subunit alpha-1, mitochondrial [Source:GMGC_GENE;Acc:GSMUA_Achr1G18330_001]

Coordinates

chr1:-:13676797..13682673

Molecular Weight (calculated)

35790.0 Da

IEP (calculated)

7.492

GRAVY (calculated)

-0.257

Length

324 amino acids

Sequence
(BLAST)

001: MSLMRRMEIA ADSLYKSKLI RGFCHLYDGQ EAVAIGLEAS ITKKDAIITA YRDHCIYLAR GGSLVESFAE LMGRRAGCSK GKGGSMHFYK KESGFFGGHG
101: IVGAQVPLGC GLAFAQRYLK EGTVTFALYG DGAANQGQLF EALNISALWD LPVILVCENN HYGMGTAEWR AAKSPAYYKR GDYVPGLKVD GMDVLAVKQA
201: CKFAKEYALQ NGPIILEMDT YRYHGHSMSD PGSTYRTRDE ITGVRQERDP IERVRKLIVS YELATASELK DFEKEVRKEV DEAIAQAKES PMPDPSELFT
301: NVYVKGFGVE AFGADRKEVK AVLP

Best Arabidopsis Sequence Match ( AT1G59900.1 )
(BLAST)

001: MALSRLSSRS NIITRPFSAA FSRLISTDTT PITIETSLPF TAHLCDPPSR SVESSSQELL DFFRTMALMR RMEIAADSLY KAKLIRGFCH LYDGQEAVAI
101: GMEAAITKKD AIITAYRDHC IFLGRGGSLH EVFSELMGRQ AGCSKGKGGS MHFYKKESSF YGGHGIVGAQ VPLGCGIAFA QKYNKEEAVT FALYGDGAAN
201: QGQLFEALNI SALWDLPAIL VCENNHYGMG TAEWRAAKSP SYYKRGDYVP GLKVDGMDAF AVKQACKFAK QHALEKGPII LEMDTYRYHG HSMSDPGSTY
301: RTRDEISGVR QERDPIERIK KLVLSHDLAT EKELKDMEKE IRKEVDDAIA KAKDCPMPEP SELFTNVYVK GFGTESFGPD RKEVKASLP

Arabidopsis Description

E1 ALPHAPyruvate dehydrogenase E1 component subunit alpha-1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P52901]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.