CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY16236	Canola	mitochondrion	74.77	85.01
Zm00001d014833_P001	Maize	cytosol, golgi	17.27	84.44
CDY40292	Canola	mitochondrion	73.86	82.28
CDY31596	Canola	mitochondrion	12.5	82.09
CDY28458	Canola	mitochondrion	73.41	81.77
GSMUA_Achr7P05520_001	Banana	cytosol, mitochondrion	53.64	81.1
GSMUA_Achr1P18330_001	Banana	cytosol, mitochondrion	59.55	80.86
CDY70124	Canola	cytosol	26.36	80.0
AT1G24180.1	Thale cress	mitochondrion	71.14	79.64
CDY11622	Canola	mitochondrion	69.32	77.81
CDY38784	Canola	mitochondrion	69.09	77.55
TraesCS6A01G311800.1	Wheat	golgi	63.86	75.74
KRH69435	Soybean	mitochondrion	65.91	73.23
Os02t0739600-01	Rice	mitochondrion	64.77	73.08
TraesCS6D01G291100.1	Wheat	mitochondrion	64.32	72.94
TraesCS6B01G342000.1	Wheat	mitochondrion	64.32	72.94
CDY33613	Canola	mitochondrion	64.09	72.49
CDY24500	Canola	mitochondrion	64.09	72.49
KRH74712	Soybean	mitochondrion	60.23	72.4
Zm00001d017985_P001	Maize	mitochondrion	63.86	72.05
EES05555	Sorghum	mitochondrion	63.64	71.79
KRH45768	Soybean	mitochondrion	64.09	71.57
KRG99219	Soybean	mitochondrion	55.91	71.51
VIT_01s0026g00990.t01	Wine grape	mitochondrion, plastid	64.09	70.85
PGSC0003DMT400058223	Potato	mitochondrion	62.95	70.84
Solyc05g006520.2.1	Tomato	plastid	62.73	70.59
VIT_09s0018g01940.t01	Wine grape	mitochondrion, plastid	63.64	70.35
Zm00001d052289_P001	Maize	mitochondrion	62.05	70.0
TraesCS7A01G238900.1	Wheat	mitochondrion	62.05	69.82
HORVU6Hr1G076810.1	Barley	plastid	64.09	69.8
TraesCS7D01G199900.1	Wheat	golgi	62.5	69.8
PGSC0003DMT400004851	Potato	mitochondrion	61.36	69.59
Solyc04g005080.2.1	Tomato	mitochondrion, unclear	61.82	69.57
Zm00001d044748_P002	Maize	mitochondrion	61.36	68.88
CDY55062	Canola	cytosol	29.32	68.62
Zm00001d014514_P001	Maize	cytosol, mitochondrion, plastid	21.14	67.88
TraesCS7B01G103800.2	Wheat	mitochondrion	55.68	67.68
EER88157	Sorghum	mitochondrion	60.68	67.59
Os06t0246500-01	Rice	plastid	60.91	67.34
KRG95283	Soybean	cytosol, mitochondrion, plastid	22.05	59.15
CDY55064	Canola	plasma membrane	40.68	54.57
HORVU7Hr1G040460.4	Barley	mitochondrion	62.27	54.47
CDY37427	Canola	cytosol, mitochondrion, plastid	13.41	38.31
CDY37428	Canola	cytosol	12.05	36.05
CDY37473	Canola	plastid	30.91	32.15
CDY32445	Canola	plastid	30.91	32.0
CDY15202	Canola	plastid	30.91	31.7
CDX90009	Canola	plastid	30.68	31.69
CDY50237	Canola	mitochondrion	20.45	19.07
CDY65512	Canola	mitochondrion	20.45	19.07
CDX96593	Canola	mitochondrion	20.23	18.9
CDX78354	Canola	plastid	20.0	18.64
CDX81122	Canola	plastid	19.77	18.63
CDY65109	Canola	mitochondrion	19.77	18.39
Solyc04g025710.1.1	Tomato	cytosol	3.86	15.74
Os02t0739700-01	Rice	plastid	3.64	3.63

Protein Annotations

EnsemblPlants:CDY14675	EnsemblPlantsGene:GSBRNA2T00084462001	Gene3D:3.40.50.970	GO:A0A078FJR8	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016624	GO:GO:0055114	InterPro:DH_E1	InterPro:THDP-binding
PANTHER:PTHR11516	PANTHER:PTHR11516:SF38	PFAM:PF00676	ProteinID:CDY14675	ProteinID:CDY14675.1	SEG:seg
SUPFAM:SSF52518	UniParc:UPI0004EDDDE6	UniProt:A0A078FJR8	MapMan:2.2.1.1.1	:	:

Description

BnaC05g19320DBnaC05g19320D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FJR8]

Coordinates

chrLK032046:-:131360..133816

Molecular Weight (calculated)

49105.9 Da

IEP (calculated)

7.798

GRAVY (calculated)

-0.421

Length

440 amino acids

Sequence
(BLAST)

001: MKTNIICKQY LDFVIEEDQC FFHLPTKSFN LLTPKKETFQ TKSENGVITT LSPIHHRFTS LPPPLRFDRH NPDHNRNGRP FHRPPMRRSA TLRGDLIPGD
101: PLLLPRMEIA ADSLYKSKLI RGFCHLYDGQ EALAVGMEAG ITKEDAIITS YRDHCTFLGR GGELVDAFSE LMGRMRGCSN GKGGSMHFYK KDASFYGGHG
201: IVGAQIPLGC GLAFAQKYSK EENVSFVLYG DGDGAANQGQ LFEALNIAAL WDLPAILVCE NNHDGMGTAT WRSAKSPAYF KRGDYVPGLK VDGMDVLAVK
301: QACKFAKEHA LKNGPIFLLI GKTQTPNKTI ILEMDTYRYH GHSMSDPGST YRTRDEVSGV RQVRDPIERV RKLLLSHDIA TEKELKDIEK EVRKEVDDAV
401: AQAKESPVPE PSELFTNMYV KDCGVESFGA DRKELKVTLA

Best Arabidopsis Sequence Match ( AT1G01090.1 )
(BLAST)

001: MATAFAPTKL TATVPLHGSH ENRLLLPIRL APPSSFLGST RSLSLRRLNH SNATRRSPVV SVQEVVKEKQ STNNTSLLIT KEEGLELYED MILGRSFEDM
101: CAQMYYRGKM FGFVHLYNGQ EAVSTGFIKL LTKSDSVVST YRDHVHALSK GVSARAVMSE LFGKVTGCCR GQGGSMHMFS KEHNMLGGFA FIGEGIPVAT
201: GAAFSSKYRR EVLKQDCDDV TVAFFGDGTC NNGQFFECLN MAALYKLPII FVVENNLWAI GMSHLRATSD PEIWKKGPAF GMPGVHVDGM DVLKVREVAK
301: EAVTRARRGE GPTLVECETY RFRGHSLADP DELRDAAEKA KYAARDPIAA LKKYLIENKL AKEAELKSIE KKIDELVEEA VEFADASPQP GRSQLLENVF
401: ADPKGFGIGP DGRYRCEDPK FTEGTAQV

Arabidopsis Description

PDH-E1 ALPHAPyruvate dehydrogenase E1 component subunit alpha [Source:UniProtKB/TrEMBL;Acc:A0A178W8A7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.