CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 7
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY24500	Canola	mitochondrion	98.97	98.97
CDY70124	Canola	cytosol	35.73	95.86
AT1G59900.1	Thale cress	mitochondrion	95.12	95.12
CDY31596	Canola	mitochondrion	15.68	91.04
GSMUA_Achr7P05520_001	Banana	cytosol, mitochondrion	65.81	87.97
GSMUA_Achr1P18330_001	Banana	cytosol, mitochondrion	71.98	86.42
Zm00001d014833_P001	Maize	cytosol, golgi	19.79	85.56
KRH69435	Soybean	mitochondrion	85.6	84.09
CDY38784	Canola	mitochondrion	84.58	83.93
CDY11622	Canola	mitochondrion	83.8	83.16
TraesCS6A01G311800.1	Wheat	golgi	79.18	83.02
KRH74712	Soybean	mitochondrion	76.86	81.69
KRG99219	Soybean	mitochondrion	71.98	81.4
CDY16236	Canola	mitochondrion	80.98	81.4
TraesCS6B01G342000.1	Wheat	mitochondrion	80.72	80.93
TraesCS6D01G291100.1	Wheat	mitochondrion	80.72	80.93
Solyc05g006520.2.1	Tomato	plastid	80.98	80.56
PGSC0003DMT400058223	Potato	mitochondrion	80.98	80.56
CDY28458	Canola	mitochondrion	81.75	80.51
KRH45768	Soybean	mitochondrion	81.49	80.46
CDY40292	Canola	mitochondrion	81.23	80.0
Os02t0739600-01	Rice	mitochondrion	80.21	80.0
CDY55062	Canola	cytosol	38.56	79.79
VIT_01s0026g00990.t01	Wine grape	mitochondrion, plastid	81.23	79.4
PGSC0003DMT400004851	Potato	mitochondrion	77.89	78.09
Solyc04g005080.2.1	Tomato	mitochondrion, unclear	78.41	78.01
EES05555	Sorghum	mitochondrion	78.15	77.95
HORVU6Hr1G076810.1	Barley	plastid	80.72	77.72
Zm00001d017985_P001	Maize	mitochondrion	77.89	77.69
VIT_09s0018g01940.t01	Wine grape	mitochondrion, plastid	79.43	77.64
Zm00001d052289_P001	Maize	mitochondrion	77.38	77.18
CDY55064	Canola	plasma membrane	64.52	76.52
TraesCS7A01G238900.1	Wheat	mitochondrion	76.09	75.7
TraesCS7D01G199900.1	Wheat	golgi	76.61	75.63
Zm00001d044748_P002	Maize	mitochondrion	75.32	74.74
EER88157	Sorghum	mitochondrion	75.32	74.18
TraesCS7B01G103800.2	Wheat	mitochondrion	68.64	73.76
Os06t0246500-01	Rice	plastid	74.81	73.12
Zm00001d014514_P001	Maize	cytosol, mitochondrion, plastid	24.42	69.34
KRG95283	Soybean	cytosol, mitochondrion, plastid	28.02	66.46
CDY14675	Canola	cytosol	72.49	64.09
HORVU7Hr1G040460.4	Barley	mitochondrion	76.61	59.24
CDY37427	Canola	cytosol, mitochondrion, plastid	16.2	40.91
CDY37428	Canola	cytosol	13.37	35.37
CDY37473	Canola	plastid	35.48	32.62
CDY32445	Canola	plastid	35.48	32.47
CDY15202	Canola	plastid	35.48	32.17
CDX90009	Canola	plastid	35.22	32.16
CDY50237	Canola	mitochondrion	26.74	22.03
CDY65512	Canola	mitochondrion	26.74	22.03
CDX96593	Canola	mitochondrion	26.22	21.66
CDY65109	Canola	mitochondrion	25.45	20.93
CDX81122	Canola	plastid	24.94	20.77
CDX78354	Canola	plastid	25.19	20.76
Solyc04g025710.1.1	Tomato	cytosol	5.4	19.44
Os02t0739700-01	Rice	plastid	3.08	2.72

Protein Annotations

KEGG:00010+1.2.4.1	KEGG:00020+1.2.4.1	KEGG:00620+1.2.4.1	MapMan:2.2.1.1.1	Gene3D:3.40.50.970	GO:A0A078H9V9
UniProt:A0A078H9V9	EnsemblPlants:CDY33613	ProteinID:CDY33613	ProteinID:CDY33613.1	ncoils:Coil	InterPro:DH_E1
GO:GO:0003674	GO:GO:0003824	GO:GO:0004739	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0006086	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016491
GO:GO:0016624	GO:GO:0043231	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00054932001	PFAM:PF00676	PANTHER:PTHR11516
PANTHER:PTHR11516:SF38	InterPro:Pyrv_DH_E1_asu_subgrp-y	SUPFAM:SSF52518	InterPro:THDP-binding	TIGRFAMs:TIGR03182	UniParc:UPI0004EBBCC0
SEG:seg	:	:	:	:	:

Description

BnaC01g28440DPyruvate dehydrogenase E1 component subunit alpha [Source:UniProtKB/TrEMBL;Acc:A0A078H9V9]

Coordinates

chrLK032318:+:212949..215731

Molecular Weight (calculated)

42922.3 Da

IEP (calculated)

7.778

GRAVY (calculated)

-0.337

Length

389 amino acids

Sequence
(BLAST)

001: MALSRLSSRS KGISRPLSAA FSRSISTDTT PITIETSLPF TAHLCDPPSR SVESSTQELL SFFRTMALMR RMEIAADSLY KAKLIRGFCH LYDGQEAVAI
101: GMEAAITKKD AIITAYRDHC IFLGRGGSLY EVFAELMGRQ DGCSKGKGGS MHFYKKDSSF YGGHGIVGAQ VPLGCGIAFA QKYSKEEAVT FAMYGDGAAN
201: QGQLFEALNI SALWDLPSIL VCENNHYGMG TAEWRAAKSP SYYKRGDYVP GLKVDGMDAF AVKQACKFAK EHALKNGPII LEMDTYRYHG HSMSDPGSTY
301: RTRDEISGVR QERDPIERIK KLVLSHDLAT EKELKDMEKE IRKEVDDAIA KAKDCPMPEP SELFTNVYVK GFGTESFGAD RKEVKAALP

Best Arabidopsis Sequence Match ( AT1G59900.1 )
(BLAST)

001: MALSRLSSRS NIITRPFSAA FSRLISTDTT PITIETSLPF TAHLCDPPSR SVESSSQELL DFFRTMALMR RMEIAADSLY KAKLIRGFCH LYDGQEAVAI
101: GMEAAITKKD AIITAYRDHC IFLGRGGSLH EVFSELMGRQ AGCSKGKGGS MHFYKKESSF YGGHGIVGAQ VPLGCGIAFA QKYNKEEAVT FALYGDGAAN
201: QGQLFEALNI SALWDLPAIL VCENNHYGMG TAEWRAAKSP SYYKRGDYVP GLKVDGMDAF AVKQACKFAK QHALEKGPII LEMDTYRYHG HSMSDPGSTY
301: RTRDEISGVR QERDPIERIK KLVLSHDLAT EKELKDMEKE IRKEVDDAIA KAKDCPMPEP SELFTNVYVK GFGTESFGPD RKEVKASLP

Arabidopsis Description

E1 ALPHAPyruvate dehydrogenase E1 component subunit alpha-1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P52901]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.