Factsheet for TraesCS7B01G103800.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G199900.1	Wheat	golgi	97.51	89.59
TraesCS7A01G238900.1	Wheat	mitochondrion	95.3	88.24
EER88157	Sorghum	mitochondrion	87.57	80.25
Zm00001d044748_P002	Maize	mitochondrion	85.08	78.57
Os06t0246500-01	Rice	plastid	86.19	78.39
GSMUA_Achr1P18330_001	Banana	cytosol, mitochondrion	66.3	74.07
TraesCS6B01G342000.1	Wheat	mitochondrion	79.28	73.97
GSMUA_Achr7P05520_001	Banana	cytosol, mitochondrion	56.91	70.79
HORVU7Hr1G040460.4	Barley	mitochondrion	97.51	70.18
CDY16236	Canola	mitochondrion	73.76	68.99
CDY24500	Canola	mitochondrion	74.03	68.89
Bra035416.1-P	Field mustard	mitochondrion	74.03	68.89
CDY33613	Canola	mitochondrion	73.76	68.64
CDY38784	Canola	mitochondrion	74.31	68.62
Bra024643.1-P	Field mustard	mitochondrion	73.2	68.48
AT1G59900.1	Thale cress	mitochondrion	73.2	68.12
CDY11622	Canola	mitochondrion	73.76	68.11
KRG99219	Soybean	mitochondrion	64.64	68.02
KRH45768	Soybean	mitochondrion	74.03	68.02
AT1G24180.1	Thale cress	mitochondrion	73.76	67.94
KRH69435	Soybean	mitochondrion	74.03	67.68
CDY40292	Canola	mitochondrion	73.76	67.59
Bra012418.1-P	Field mustard	mitochondrion	73.76	67.42
CDY28458	Canola	mitochondrion	73.48	67.34
PGSC0003DMT400004851	Potato	mitochondrion	72.1	67.27
Solyc05g006520.2.1	Tomato	plastid	72.38	67.01
PGSC0003DMT400058223	Potato	mitochondrion	72.38	67.01
Solyc04g005080.2.1	Tomato	mitochondrion, unclear	72.1	66.75
Bra016238.1-P	Field mustard	mitochondrion	73.2	66.25
VIT_09s0018g01940.t01	Wine grape	mitochondrion, plastid	72.38	65.83
KRH74712	Soybean	mitochondrion	66.3	65.57
VIT_01s0026g00990.t01	Wine grape	mitochondrion, plastid	71.27	64.82
CDY31596	Canola	mitochondrion	11.88	64.18
KRG95283	Soybean	cytosol, mitochondrion, plastid	27.9	61.59
CDY55064	Canola	plasma membrane	53.59	59.15
CDY14675	Canola	cytosol	67.68	55.68
CDY70124	Canola	cytosol	22.1	55.17
Bra017890.1-P	Field mustard	cytosol	12.71	51.11
CDY55062	Canola	cytosol	24.86	47.87
TraesCS2B01G012500.1	Wheat	plastid	35.91	30.88
TraesCS5B01G121400.3	Wheat	mitochondrion	24.86	19.19
TraesCS4B01G071500.1	Wheat	mitochondrion	24.31	18.88

Protein Annotations

EnsemblPlants:TraesCS7B01G103800.2	EnsemblPlantsGene:TraesCS7B01G103800	Gene3D:3.40.50.970	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016624	InterPro:DH_E1	InterPro:THDP-binding	ncoils:Coil	PANTHER:PTHR11516
PANTHER:PTHR11516:SF38	PFAM:PF00676	SEG:seg	SUPFAM:SSF52518	TIGR:cd02000	MapMan:2.2.1.1.1

Description

No Description!

Coordinates

chr7B:+:119213816..119216282

Molecular Weight (calculated)

39727.1 Da

IEP (calculated)

8.449

GRAVY (calculated)

-0.162

Length

362 amino acids

Sequence
(BLAST)

001: MAAAILRRLS PVASQRVPPR LLPPTLARGV SDSTEPLTVE TSIPFTSHVV DPPSREVTTT PRELAAAFRD MALMRRAEIA ADSLYKAKLI RGFCHLYDGQ
101: EAVAVGMEAA ITRRDAIITA YRDHCLYLAR GGGLVAAFAE LMGRVDGCSR GKGGSMHFYK KDANFYGGHG IVGAQVPLGC GLAFAQRYRK EGTVTFDLYG
201: DGAANQGQLF EALNMAALWK LPVILVCENN HYGMGTAEWK ASKSPAYYKR GDYVPGLKVD GMDFLAVKQA CKFAKEHVLE IGPIERDPIE RVRKLLLTHD
301: LATAQELKDM EKEIRKEVDT AIAKAKESPM PDTSELFKNV YVNDCGLESF GVDRKVVRTV LP

Best Arabidopsis Sequence Match ( AT1G01090.1 )
(BLAST)

001: MATAFAPTKL TATVPLHGSH ENRLLLPIRL APPSSFLGST RSLSLRRLNH SNATRRSPVV SVQEVVKEKQ STNNTSLLIT KEEGLELYED MILGRSFEDM
101: CAQMYYRGKM FGFVHLYNGQ EAVSTGFIKL LTKSDSVVST YRDHVHALSK GVSARAVMSE LFGKVTGCCR GQGGSMHMFS KEHNMLGGFA FIGEGIPVAT
201: GAAFSSKYRR EVLKQDCDDV TVAFFGDGTC NNGQFFECLN MAALYKLPII FVVENNLWAI GMSHLRATSD PEIWKKGPAF GMPGVHVDGM DVLKVREVAK
301: EAVTRARRGE GPTLVECETY RFRGHSLADP DELRDAAEKA KYAARDPIAA LKKYLIENKL AKEAELKSIE KKIDELVEEA VEFADASPQP GRSQLLENVF
401: ADPKGFGIGP DGRYRCEDPK FTEGTAQV

Arabidopsis Description

PDH-E1 ALPHAPyruvate dehydrogenase E1 component subunit alpha [Source:UniProtKB/TrEMBL;Acc:A0A178W8A7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.