Factsheet for Zm00001d044748_P002

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
mitochondrion 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

extracellular: 20408568
mitochondrion: 27297264
mitochondrion: 29575040

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

msms PMID: 29575040 doi

WQ Wang, Y Wang, Q Zhang, IM Møller, SQ Song

Department of Molecular Biology and Genetics, Aarhus University, DK-4200 Slagelse, Denmark., Key Laboratory of Plant Molecular Physiology, Institute of Botany, the Chinese Academy of Sciences, Beijing 100093, China., Key Laboratory of Plant Resources and Beijing Botanical Garden, Institute of Botany, the Chinese Academy of Sciences, Beijing 100093, China.

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER88157	Sorghum	mitochondrion	94.13	93.42
TraesCS7D01G199900.1	Wheat	golgi	87.5	87.06
TraesCS7A01G238900.1	Wheat	mitochondrion	86.73	86.96
Os06t0246500-01	Rice	plastid	88.01	86.68
Zm00001d014833_P001	Maize	cytosol, golgi	19.9	86.67
TraesCS7B01G103800.2	Wheat	mitochondrion	78.57	85.08
GSMUA_Achr1P18330_001	Banana	cytosol, mitochondrion	69.64	84.26
CDY31596	Canola	mitochondrion	14.29	83.58
GSMUA_Achr7P05520_001	Banana	cytosol, mitochondrion	61.48	82.82
Zm00001d017985_P001	Maize	mitochondrion	79.85	80.26
Zm00001d052289_P001	Maize	mitochondrion	79.34	79.74
CDY70124	Canola	cytosol	28.57	77.24
KRG99219	Soybean	mitochondrion	66.84	76.16
CDY24500	Canola	mitochondrion	75.0	75.58
Bra035416.1-P	Field mustard	mitochondrion	75.0	75.58
CDY33613	Canola	mitochondrion	74.74	75.32
KRH45768	Soybean	mitochondrion	75.26	74.87
KRH69435	Soybean	mitochondrion	75.0	74.24
CDY38784	Canola	mitochondrion	74.23	74.23
PGSC0003DMT400058223	Potato	mitochondrion	73.98	74.17
Solyc05g006520.2.1	Tomato	plastid	73.98	74.17
CDY16236	Canola	mitochondrion	73.21	74.16
AT1G59900.1	Thale cress	mitochondrion	73.47	74.04
Bra024643.1-P	Field mustard	mitochondrion	72.7	73.64
CDY11622	Canola	mitochondrion	73.47	73.47
CDY40292	Canola	mitochondrion	73.47	72.91
VIT_09s0018g01940.t01	Wine grape	mitochondrion, plastid	73.98	72.86
AT1G24180.1	Thale cress	mitochondrion	72.96	72.77
Bra012418.1-P	Field mustard	mitochondrion	73.47	72.73
CDY28458	Canola	mitochondrion	73.21	72.66
PGSC0003DMT400004851	Potato	mitochondrion	71.68	72.42
KRH74712	Soybean	mitochondrion	67.35	72.13
Solyc04g005080.2.1	Tomato	mitochondrion, unclear	71.68	71.87
Bra016238.1-P	Field mustard	mitochondrion	73.21	71.75
VIT_01s0026g00990.t01	Wine grape	mitochondrion, plastid	72.7	71.61
Bra017890.1-P	Field mustard	cytosol	16.33	71.11
Zm00001d014514_P001	Maize	cytosol, mitochondrion, plastid	24.74	70.8
HORVU7Hr1G040460.4	Barley	mitochondrion	87.5	68.19
CDY55062	Canola	cytosol	31.38	65.43
KRG95283	Soybean	cytosol, mitochondrion, plastid	26.28	62.8
CDY14675	Canola	cytosol	68.88	61.36
CDY55064	Canola	plasma membrane	48.21	57.62
Zm00001d004473_P001	Maize	plastid	37.24	34.11
Zm00001d023694_P001	Maize	mitochondrion	27.55	22.13

Protein Annotations

KEGG:00010+1.2.4.1	KEGG:00020+1.2.4.1	KEGG:00620+1.2.4.1	EntrezGene:100272256	MapMan:2.2.1.1.1	Gene3D:3.40.50.970
ProteinID:AQL00809.1	UniProt:B4FML9	EMBL:BT038357	ncoils:Coil	InterPro:DH_E1	GO:GO:0003674
GO:GO:0003824	GO:GO:0004739	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006086
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016491	GO:GO:0016624
GO:GO:0043231	GO:GO:0055114	PFAM:PF00676	PANTHER:PTHR11516	PANTHER:PTHR11516:SF38	InterPro:Pyrv_DH_E1_asu_subgrp-y
SUPFAM:SSF52518	InterPro:THDP-binding	TIGRFAMs:TIGR03182	UniParc:UPI00017B6CBE	EnsemblPlantsGene:Zm00001d044748	EnsemblPlants:Zm00001d044748_P002
EnsemblPlants:Zm00001d044748_T002	SEG:seg	:	:	:	:

Description

Pyruvate dehydrogenase E1 component subunit alpha-1 mitochondrial

Coordinates

chr9:+:1120172..1124593

Molecular Weight (calculated)

43149.8 Da

IEP (calculated)

7.521

GRAVY (calculated)

-0.221

Length

392 amino acids

Sequence
(BLAST)

001: MAAAILRRLV PTAASQLVAP LPLLARGVSD SADAVTVDTS VPFKSHIVDP PPREATTSAR ELLSFFRDMS LMRRFEIAAD SLYKAKLIRG FCHLYDGQEA
101: VAVGMEAAAT RADAIITAYR DHCAYLARGG DPVAAFAELM GRRDGCSRGK GGSMHFYKRD ANFFGGHGIV GAQVPLGCGI AFAQRYRKEG TVTFDLYGDG
201: AANQGQLFEA LNMAALWKLP VILVCENNHY GMGTAEWRAS KSPAYYKRGD YVPGLKVDGM DVLAVKQACK FAKEHALENG PIILEMDTYR YHGHSMSDPG
301: STYRTRDEIA GIRQERDPIE RVRKLMLVHE FATAQELKDM EKEIRKQVDA AIAKAKECPL PDPSELFTNV YVNDCGLESF GVDRKEVRTV LP

Best Arabidopsis Sequence Match ( AT1G24180.1 )
(BLAST)

001: MALSRLSSRS NTFLKPAITA LPSSIRRHVS TDSSPITIET AVPFTSHLCE SPSRSVETSS EEILAFFRDM ARMRRMEIAA DSLYKAKLIR GFCHLYDGQE
101: ALAVGMEAAI TKKDAIITSY RDHCTFIGRG GKLVDAFSEL MGRKTGCSHG KGGSMHFYKK DASFYGGHGI VGAQIPLGCG LAFAQKYNKD EAVTFALYGD
201: GAANQGQLFE ALNISALWDL PAILVCENNH YGMGTATWRS AKSPAYFKRG DYVPGLKVDG MDALAVKQAC KFAKEHALKN GPIILEMDTY RYHGHSMSDP
301: GSTYRTRDEI SGVRQVRDPI ERVRKLLLTH DIATEKELKD MEKEIRKEVD DAVAQAKESP IPDASELFTN MYVKDCGVES FGADRKELKV TLP

Arabidopsis Description

IAR4Pyruvate dehydrogenase E1 component subunit alpha-2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8H1Y0]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.