Factsheet for AT1G24180.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 8
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY16236	Canola	mitochondrion	90.59	91.99
Bra024643.1-P	Field mustard	mitochondrion	90.08	91.47
CDY28458	Canola	mitochondrion	91.86	91.39
Bra012418.1-P	Field mustard	mitochondrion	91.6	90.91
CDY40292	Canola	mitochondrion	91.35	90.89
Zm00001d014833_P001	Maize	cytosol, golgi	19.85	86.67
AT1G59900.1	Thale cress	mitochondrion	81.17	82.01
GSMUA_Achr1P18330_001	Banana	cytosol, mitochondrion	67.43	81.79
GSMUA_Achr7P05520_001	Banana	cytosol, mitochondrion	60.56	81.79
TraesCS6A01G311800.1	Wheat	golgi	76.08	80.59
KRG99219	Soybean	mitochondrion	70.48	80.52
KRH69435	Soybean	mitochondrion	80.66	80.05
KRH45768	Soybean	mitochondrion	80.15	79.95
Os02t0739600-01	Rice	mitochondrion	78.63	79.23
Zm00001d017985_P001	Maize	mitochondrion	77.86	78.46
TraesCS6B01G342000.1	Wheat	mitochondrion	77.35	78.35
TraesCS6D01G291100.1	Wheat	mitochondrion	77.35	78.35
EES05555	Sorghum	mitochondrion	77.61	78.21
KRH74712	Soybean	mitochondrion	72.77	78.14
Zm00001d052289_P001	Maize	mitochondrion	76.34	76.92
PGSC0003DMT400058223	Potato	mitochondrion	76.08	76.47
VIT_01s0026g00990.t01	Wine grape	mitochondrion, plastid	77.35	76.38
Solyc05g006520.2.1	Tomato	plastid	75.83	76.21
TraesCS7A01G238900.1	Wheat	mitochondrion	75.83	76.21
TraesCS7D01G199900.1	Wheat	golgi	76.08	75.89
VIT_09s0018g01940.t01	Wine grape	mitochondrion, plastid	76.59	75.63
HORVU6Hr1G076810.1	Barley	plastid	77.1	75.0
PGSC0003DMT400004851	Potato	mitochondrion	74.05	75.0
Solyc04g005080.2.1	Tomato	mitochondrion, unclear	74.55	74.94
TraesCS7B01G103800.2	Wheat	mitochondrion	67.94	73.76
Zm00001d044748_P002	Maize	mitochondrion	72.77	72.96
EER88157	Sorghum	mitochondrion	73.03	72.66
Os06t0246500-01	Rice	plastid	73.54	72.61
CDY14675	Canola	cytosol	79.64	71.14
Zm00001d014514_P001	Maize	cytosol, mitochondrion, plastid	23.92	68.61
KRG95283	Soybean	cytosol, mitochondrion, plastid	27.23	65.24
HORVU7Hr1G040460.4	Barley	mitochondrion	75.83	59.24
AT1G01090.1	Thale cress	plastid	35.62	32.71
AT5G09300.1	Thale cress	plastid	25.19	20.97
AT1G21400.5	Thale cress	plastid	24.68	18.51
Solyc04g025710.1.1	Tomato	cytosol	4.58	16.67
AT5G34780.1	Thale cress	cytosol, mitochondrion	15.01	16.16
Os02t0739700-01	Rice	plastid	2.54	2.27

Protein Annotations

KEGG:00010+1.2.4.1	KEGG:00020+1.2.4.1	KEGG:00620+1.2.4.1	MapMan:2.2.1.1.1	Gene3D:3.40.50.970	EntrezGene:839031
ProteinID:AAC00577.1	ProteinID:AEE30492.1	EMBL:AF360215	ArrayExpress:AT1G24180	EnsemblPlantsGene:AT1G24180	RefSeq:AT1G24180
TAIR:AT1G24180	RefSeq:AT1G24180-TAIR-G	EnsemblPlants:AT1G24180.1	TAIR:AT1G24180.1	EMBL:AY051018	EMBL:AY088101
EMBL:AY135561	Unigene:At.24830	InterPro:DH_E1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004739
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737
GO:GO:0005739	GO:GO:0005759	GO:GO:0005829	GO:GO:0005975	GO:GO:0006086	GO:GO:0006091
GO:GO:0006096	GO:GO:0006139	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270
GO:GO:0009056	GO:GO:0009058	GO:GO:0009628	GO:GO:0009651	GO:GO:0009987	GO:GO:0016491
GO:GO:0016624	GO:GO:0043231	GO:GO:0050897	GO:GO:0055114	Symbol:IAR4	RefSeq:NP_173828.1
PFAM:PF00676	PO:PO:0000005	PO:PO:0000013	PO:PO:0000037	PO:PO:0000084	PO:PO:0000230
PO:PO:0000293	PO:PO:0001016	PO:PO:0001017	PO:PO:0001054	PO:PO:0001078	PO:PO:0001081
PO:PO:0001185	PO:PO:0004507	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098	PO:PO:0007103
PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009005
PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030
PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020030
PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PO:PO:0025195	PO:PO:0025281
PANTHER:PTHR11516	PANTHER:PTHR11516:SF38	InterPro:Pyrv_DH_E1_asu_subgrp-y	UniProt:Q8H1Y0	SUPFAM:SSF52518	InterPro:THDP-binding
TIGRFAMs:TIGR03182	UniParc:UPI000009F7B7	SEG:seg	:	:	:

Description

IAR4Pyruvate dehydrogenase E1 component subunit alpha-2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8H1Y0]

Coordinates

chr1:-:8560420..8563502

Molecular Weight (calculated)

43360.9 Da

IEP (calculated)

8.019

GRAVY (calculated)

-0.317

Length

393 amino acids

Sequence
(BLAST)

001: MALSRLSSRS NTFLKPAITA LPSSIRRHVS TDSSPITIET AVPFTSHLCE SPSRSVETSS EEILAFFRDM ARMRRMEIAA DSLYKAKLIR GFCHLYDGQE
101: ALAVGMEAAI TKKDAIITSY RDHCTFIGRG GKLVDAFSEL MGRKTGCSHG KGGSMHFYKK DASFYGGHGI VGAQIPLGCG LAFAQKYNKD EAVTFALYGD
201: GAANQGQLFE ALNISALWDL PAILVCENNH YGMGTATWRS AKSPAYFKRG DYVPGLKVDG MDALAVKQAC KFAKEHALKN GPIILEMDTY RYHGHSMSDP
301: GSTYRTRDEI SGVRQVRDPI ERVRKLLLTH DIATEKELKD MEKEIRKEVD DAVAQAKESP IPDASELFTN MYVKDCGVES FGADRKELKV TLP

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.