CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 8
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra024643.1-P	Field mustard	mitochondrion	99.48	99.48
CDY40292	Canola	mitochondrion	95.87	93.92
CDY28458	Canola	mitochondrion	95.61	93.67
AT1G24180.1	Thale cress	mitochondrion	91.99	90.59
CDY11622	Canola	mitochondrion	87.08	85.97
CDY38784	Canola	mitochondrion	86.82	85.71
Zm00001d014833_P001	Maize	cytosol, golgi	19.9	85.56
CDY31596	Canola	mitochondrion	14.47	83.58
GSMUA_Achr7P05520_001	Banana	cytosol, mitochondrion	61.76	82.13
GSMUA_Achr1P18330_001	Banana	cytosol, mitochondrion	68.48	81.79
CDY24500	Canola	mitochondrion	81.65	81.23
CDY33613	Canola	mitochondrion	81.4	80.98
TraesCS6A01G311800.1	Wheat	golgi	77.52	80.86
CDY70124	Canola	cytosol	29.97	80.0
KRH69435	Soybean	mitochondrion	81.4	79.55
KRG99219	Soybean	mitochondrion	70.54	79.36
TraesCS6D01G291100.1	Wheat	mitochondrion	78.55	78.35
TraesCS6B01G342000.1	Wheat	mitochondrion	78.55	78.35
Os02t0739600-01	Rice	mitochondrion	78.81	78.21
KRH45768	Soybean	mitochondrion	79.59	78.17
KRH74712	Soybean	mitochondrion	73.64	77.87
Zm00001d017985_P001	Maize	mitochondrion	77.78	77.18
EES05555	Sorghum	mitochondrion	77.26	76.67
PGSC0003DMT400058223	Potato	mitochondrion	77.0	76.21
Solyc05g006520.2.1	Tomato	plastid	76.74	75.96
TraesCS7A01G238900.1	Wheat	mitochondrion	76.49	75.7
Zm00001d052289_P001	Maize	mitochondrion	76.23	75.64
TraesCS7D01G199900.1	Wheat	golgi	76.74	75.38
VIT_01s0026g00990.t01	Wine grape	mitochondrion, plastid	77.52	75.38
VIT_09s0018g01940.t01	Wine grape	mitochondrion, plastid	77.26	75.13
HORVU6Hr1G076810.1	Barley	plastid	78.29	75.0
CDY14675	Canola	cytosol	85.01	74.77
TraesCS7B01G103800.2	Wheat	mitochondrion	68.99	73.76
Zm00001d044748_P002	Maize	mitochondrion	74.16	73.21
PGSC0003DMT400004851	Potato	mitochondrion	73.39	73.2
Solyc04g005080.2.1	Tomato	mitochondrion, unclear	73.9	73.15
EER88157	Sorghum	mitochondrion	74.16	72.66
Os06t0246500-01	Rice	plastid	74.16	72.11
Zm00001d014514_P001	Maize	cytosol, mitochondrion, plastid	24.55	69.34
CDY55062	Canola	cytosol	33.33	68.62
KRG95283	Soybean	cytosol, mitochondrion, plastid	27.39	64.63
CDY55064	Canola	plasma membrane	53.23	62.8
HORVU7Hr1G040460.4	Barley	mitochondrion	76.74	59.05
CDY37427	Canola	cytosol, mitochondrion, plastid	15.5	38.96
CDY37428	Canola	cytosol	13.44	35.37
CDY37473	Canola	plastid	35.4	32.39
CDY32445	Canola	plastid	35.4	32.24
CDY15202	Canola	plastid	35.4	31.93
CDX90009	Canola	plastid	35.14	31.92
CDX96593	Canola	mitochondrion	23.77	19.53
CDY50237	Canola	mitochondrion	23.77	19.49
CDY65512	Canola	mitochondrion	23.77	19.49
CDX78354	Canola	plastid	23.51	19.28
CDX81122	Canola	plastid	23.26	19.27
CDY65109	Canola	mitochondrion	23.0	18.82
Solyc04g025710.1.1	Tomato	cytosol	4.39	15.74
Os02t0739700-01	Rice	plastid	2.58	2.27

Protein Annotations

KEGG:00010+1.2.4.1	KEGG:00020+1.2.4.1	KEGG:00620+1.2.4.1	MapMan:2.2.1.1.1	Gene3D:3.40.50.970	GO:A0A078FT15
UniProt:A0A078FT15	EnsemblPlants:CDY16236	ProteinID:CDY16236	ProteinID:CDY16236.1	InterPro:DH_E1	GO:GO:0003674
GO:GO:0003824	GO:GO:0004739	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006086
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016491	GO:GO:0016624
GO:GO:0043231	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00090697001	PFAM:PF00676	PANTHER:PTHR11516	PANTHER:PTHR11516:SF38
InterPro:Pyrv_DH_E1_asu_subgrp-y	SUPFAM:SSF52518	InterPro:THDP-binding	TIGRFAMs:TIGR03182	UniParc:UPI0004EEB9EA	SEG:seg

Description

BnaA09g29700DPyruvate dehydrogenase E1 component subunit alpha [Source:UniProtKB/TrEMBL;Acc:A0A078FT15]

Coordinates

chrLK032061:+:693399..695411

Molecular Weight (calculated)

42832.3 Da

IEP (calculated)

7.756

GRAVY (calculated)

-0.325

Length

387 amino acids

Sequence
(BLAST)

001: MALSRLSLRS TTFLKPSSLR RHVSTDTTPI TIETAAPFTS HQCDPPSRSV ETSSAEILSF FRDMARMRRM EIAADSLYKS KLIRGFCHLY DGQEALAVGM
101: EAAITKKDAI ITSYRDHCTF LGRGGELVDA FSELMGRMRG CSNGKGGSMH FYKKDACFYG GHGIVGAQIP LGCGLAFAQK YSKEENVSFV LYGDGAANQG
201: QLFEALNIAA LWDLPAILVC ENNHYGMGTA TWRSAKSPAY FKRGDYVPGL KVDGMDVLAV KQACKFAKEH ALKNGPIILE MDTYRYHGHS MSDPGSTYRT
301: RDEVSGVRQV RDPIERVRKL LLSHDIATEK ELKDMEKEVR KEVDDAVAQA KESPVPEASE LFTNMYVKDC GVESFGADRK ELKVTLA

Best Arabidopsis Sequence Match ( AT1G24180.1 )
(BLAST)

001: MALSRLSSRS NTFLKPAITA LPSSIRRHVS TDSSPITIET AVPFTSHLCE SPSRSVETSS EEILAFFRDM ARMRRMEIAA DSLYKAKLIR GFCHLYDGQE
101: ALAVGMEAAI TKKDAIITSY RDHCTFIGRG GKLVDAFSEL MGRKTGCSHG KGGSMHFYKK DASFYGGHGI VGAQIPLGCG LAFAQKYNKD EAVTFALYGD
201: GAANQGQLFE ALNISALWDL PAILVCENNH YGMGTATWRS AKSPAYFKRG DYVPGLKVDG MDALAVKQAC KFAKEHALKN GPIILEMDTY RYHGHSMSDP
301: GSTYRTRDEI SGVRQVRDPI ERVRKLLLTH DIATEKELKD MEKEIRKEVD DAVAQAKESP IPDASELFTN MYVKDCGVES FGADRKELKV TLP

Arabidopsis Description

IAR4Pyruvate dehydrogenase E1 component subunit alpha-2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8H1Y0]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.