CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 7
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY40292	Canola	mitochondrion	98.73	98.73
CDY16236	Canola	mitochondrion	93.67	95.61
AT1G24180.1	Thale cress	mitochondrion	91.39	91.86
CDY38784	Canola	mitochondrion	84.81	85.46
CDY11622	Canola	mitochondrion	84.56	85.2
Zm00001d014833_P001	Maize	cytosol, golgi	19.24	84.44
CDY31596	Canola	mitochondrion	14.18	83.58
CDY24500	Canola	mitochondrion	81.01	82.26
CDY33613	Canola	mitochondrion	80.51	81.75
GSMUA_Achr1P18330_001	Banana	cytosol, mitochondrion	66.84	81.48
GSMUA_Achr7P05520_001	Banana	cytosol, mitochondrion	60.0	81.44
CDY70124	Canola	cytosol	29.62	80.69
TraesCS6A01G311800.1	Wheat	golgi	75.19	80.05
KRG99219	Soybean	mitochondrion	69.37	79.65
KRH69435	Soybean	mitochondrion	79.75	79.55
Os02t0739600-01	Rice	mitochondrion	77.97	78.97
KRH45768	Soybean	mitochondrion	78.48	78.68
Zm00001d017985_P001	Maize	mitochondrion	77.22	78.21
TraesCS6B01G342000.1	Wheat	mitochondrion	76.46	77.84
TraesCS6D01G291100.1	Wheat	mitochondrion	76.46	77.84
EES05555	Sorghum	mitochondrion	76.71	77.69
KRH74712	Soybean	mitochondrion	71.14	76.78
Zm00001d052289_P001	Maize	mitochondrion	75.44	76.41
PGSC0003DMT400058223	Potato	mitochondrion	75.19	75.96
Solyc05g006520.2.1	Tomato	plastid	74.94	75.7
VIT_01s0026g00990.t01	Wine grape	mitochondrion, plastid	76.2	75.63
TraesCS7A01G238900.1	Wheat	mitochondrion	74.68	75.45
VIT_09s0018g01940.t01	Wine grape	mitochondrion, plastid	75.95	75.38
TraesCS7D01G199900.1	Wheat	golgi	74.94	75.13
HORVU6Hr1G076810.1	Barley	plastid	76.2	74.5
Solyc04g005080.2.1	Tomato	mitochondrion, unclear	73.16	73.91
PGSC0003DMT400004851	Potato	mitochondrion	72.41	73.71
TraesCS7B01G103800.2	Wheat	mitochondrion	67.34	73.48
EER88157	Sorghum	mitochondrion	73.42	73.42
CDY14675	Canola	cytosol	81.77	73.41
Zm00001d044748_P002	Maize	mitochondrion	72.66	73.21
Os06t0246500-01	Rice	plastid	73.16	72.61
Zm00001d014514_P001	Maize	cytosol, mitochondrion, plastid	24.05	69.34
CDY55062	Canola	cytosol	32.91	69.15
KRG95283	Soybean	cytosol, mitochondrion, plastid	26.84	64.63
CDY55064	Canola	plasma membrane	52.41	63.11
HORVU7Hr1G040460.4	Barley	mitochondrion	74.68	58.65
CDY37427	Canola	cytosol, mitochondrion, plastid	15.19	38.96
CDY37428	Canola	cytosol	12.91	34.69
CDY37473	Canola	plastid	34.43	32.15
CDY32445	Canola	plastid	34.43	32.0
CDY15202	Canola	plastid	34.68	31.93
CDX90009	Canola	plastid	34.43	31.92
CDX96593	Canola	mitochondrion	24.56	20.59
CDY50237	Canola	mitochondrion	24.56	20.55
CDY65512	Canola	mitochondrion	24.56	20.55
CDX81122	Canola	plastid	24.05	20.34
CDX78354	Canola	plastid	24.05	20.13
CDY65109	Canola	mitochondrion	23.8	19.87
Solyc04g025710.1.1	Tomato	cytosol	4.56	16.67
Os02t0739700-01	Rice	plastid	2.53	2.27

Protein Annotations

KEGG:00010+1.2.4.1	KEGG:00020+1.2.4.1	KEGG:00620+1.2.4.1	MapMan:2.2.1.1.1	Gene3D:3.40.50.970	GO:A0A078GV03
UniProt:A0A078GV03	EnsemblPlants:CDY28458	ProteinID:CDY28458	ProteinID:CDY28458.1	InterPro:DH_E1	GO:GO:0003674
GO:GO:0003824	GO:GO:0004739	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006086
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016491	GO:GO:0016624
GO:GO:0043231	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00040341001	PFAM:PF00676	PANTHER:PTHR11516	PANTHER:PTHR11516:SF38
InterPro:Pyrv_DH_E1_asu_subgrp-y	SUPFAM:SSF52518	InterPro:THDP-binding	TIGRFAMs:TIGR03182	UniParc:UPI0004EACDC0	SEG:seg

Description

BnaC07g12860DPyruvate dehydrogenase E1 component subunit alpha [Source:UniProtKB/TrEMBL;Acc:A0A078GV03]

Coordinates

chrLK032220:+:357335..359840

Molecular Weight (calculated)

43744.3 Da

IEP (calculated)

7.967

GRAVY (calculated)

-0.329

Length

395 amino acids

Sequence
(BLAST)

001: MALSRLSLRS NRFLRPSTTA AALPSSIRRH VSTDTTPITI ETAVPFESHL CDAPSRSVET SSAEILSFFR DMARMRRMEI AADSLYKSKL IRGFCHLYDG
101: QEALAVGMEA AITRKDAIIT SYRDHCTFLG RGGELVDAFS ELMGRKRGCS NGKGGSMHFY KKDACFYGGH GIVGAQIPLG CGLAFAQKYS KEEFVTFTLY
201: GDGAANQGQL FEALNIAALW DLPAILVCEN NHYGMGTATW RSAKSPAYFK RGDYVPGLKV DGMDALAVKQ ACKFAKEHAL KNGPIVLEMD TYRYHGHSMS
301: DPGSTYRTRD EVSGVRQVRD PIERVRKLLL SHDIATEKEL KDMEKEVRKE VDDAVAQAKE SPVPEPSELF TNMYVKDCGV ESFGADRKEL KVTLT

Best Arabidopsis Sequence Match ( AT1G24180.1 )
(BLAST)

001: MALSRLSSRS NTFLKPAITA LPSSIRRHVS TDSSPITIET AVPFTSHLCE SPSRSVETSS EEILAFFRDM ARMRRMEIAA DSLYKAKLIR GFCHLYDGQE
101: ALAVGMEAAI TKKDAIITSY RDHCTFIGRG GKLVDAFSEL MGRKTGCSHG KGGSMHFYKK DASFYGGHGI VGAQIPLGCG LAFAQKYNKD EAVTFALYGD
201: GAANQGQLFE ALNISALWDL PAILVCENNH YGMGTATWRS AKSPAYFKRG DYVPGLKVDG MDALAVKQAC KFAKEHALKN GPIILEMDTY RYHGHSMSDP
301: GSTYRTRDEI SGVRQVRDPI ERVRKLLLTH DIATEKELKD MEKEIRKEVD DAVAQAKESP IPDASELFTN MYVKDCGVES FGADRKELKV TLP

Arabidopsis Description

IAR4Pyruvate dehydrogenase E1 component subunit alpha-2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8H1Y0]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.