CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX78354	Canola	plastid	94.22	93.22
AT5G09300.1	Thale cress	plastid	87.37	86.44
VIT_04s0044g01490.t01	Wine grape	mitochondrion	67.45	65.49
GSMUA_Achr3P18980_001	Banana	mitochondrion	63.6	64.57
KRG99480	Soybean	cytosol	27.41	63.05
PGSC0003DMT400060275	Potato	mitochondrion	62.74	62.74
CDX96593	Canola	mitochondrion	63.17	62.63
TraesCS5B01G121400.3	Wheat	mitochondrion	62.74	62.47
TraesCS4B01G071500.1	Wheat	mitochondrion	62.31	62.45
Solyc05g056480.2.1	Tomato	plastid	62.31	62.31
TraesCS5D01G126700.1	Wheat	mitochondrion	62.53	62.26
KRH64030	Soybean	mitochondrion, plastid	63.17	62.24
TraesCS5A01G120000.3	Wheat	mitochondrion	62.31	62.05
CDY50237	Canola	mitochondrion	62.53	61.86
CDY65512	Canola	mitochondrion	62.31	61.65
HORVU5Hr1G034820.3	Barley	mitochondrion	61.88	61.62
CDY65109	Canola	mitochondrion	62.31	61.52
Os12t0183100-01	Rice	mitochondrion	63.6	61.11
Zm00001d023694_P001	Maize	mitochondrion	63.6	60.86
KRH53908	Soybean	cytosol	15.42	60.0
KXG23145	Sorghum	mitochondrion	64.24	59.29
CDY31596	Canola	mitochondrion	4.5	31.34
CDY70124	Canola	cytosol	9.64	31.03
CDY55062	Canola	cytosol	10.71	26.6
CDY33613	Canola	mitochondrion	20.77	24.94
CDY24500	Canola	mitochondrion	20.56	24.68
CDY37427	Canola	cytosol, mitochondrion, plastid	8.14	24.68
CDY38784	Canola	mitochondrion	20.56	24.49
CDY11622	Canola	mitochondrion	20.56	24.49
CDY40292	Canola	mitochondrion	20.34	24.05
CDY28458	Canola	mitochondrion	20.34	24.05
CDY16236	Canola	mitochondrion	19.27	23.26
CDY37473	Canola	plastid	20.13	22.22
CDY32445	Canola	plastid	20.13	22.12
CDX90009	Canola	plastid	19.91	21.83
CDY37428	Canola	cytosol	6.85	21.77
CDY15202	Canola	plastid	19.91	21.68
CDY14675	Canola	cytosol	18.63	19.77
CDY55064	Canola	plasma membrane	12.42	17.68

Protein Annotations

EnsemblPlants:CDX81122	EnsemblPlantsGene:GSBRNA2T00134571001	Gene3D:3.40.50.970	GO:A0A078CWK9	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016624	InterPro:DH_E1	InterPro:THDP-binding	PANTHER:PTHR43380
PANTHER:PTHR43380:SF2	PFAM:PF00676	ProteinID:CDX81122	ProteinID:CDX81122.1	SEG:seg	SUPFAM:SSF52518
UniParc:UPI0004EE6B0B	MapMan:4.2.7.2.1.1	:	:	:	:

Description

BnaC03g03760D

Coordinates

chrLK031823:-:1831652..1833959

Molecular Weight (calculated)

52431.8 Da

IEP (calculated)

6.797

GRAVY (calculated)

-0.459

Length

467 amino acids

Sequence
(BLAST)

001: MAQHLKSSKS TFLNVLRHSL AFGSPSHASR HLRQKLPHGG PPSIKKVSPN PLTRLCNTMV DTLSSSHEDT NSQVMDFPGG KVSFTPEIHF ISESNEERVP
101: CYRVLDDNGQ QLPNSQFVPV SKEIAVKMYS DMVTLQMMDN IFYEAQRQGR LSFYATAYGE EAINIASAAA LSPDDVIFPQ YREPGVLLWR GFTLQEFANQ
201: CFGNKSDYGK GRQMPVHYGS NKLNYFTVSA TIATQLPNAV GAAYSLKMDG KDACAVTFFG DGGSSEGDFH AAMNFAAVME APVLFICRNN GWAISTPTSD
301: QFRSDGVVVK GRAYGIRSIR VDGNDALAMY SAVHEAREMA IREHRPILIE ALTYRVGHHS TSDDSTRYRS ADEIEWWNKA RNPLSRFRTW VESNGWWSDE
401: AESDLRSRIK KEMLEAIRVA EKTEKPNLNH MFSDVYDVPP LNLREQELLV RQAIKSHPQD YPSDVPL

Best Arabidopsis Sequence Match ( AT5G09300.1 )
(BLAST)

001: MALHLRSSFS SKSTLLNILR HNLGFGSRSH VTRHIRQILP HDPPLRGSQN PISRLCNTMA EPETLSSFVQ HEYANNHQVM DFPGGKVAFT PEIQFISESD
101: KERVPCYRVL DDNGQLITNS QFVQVSEEVA VKIYSDMVTL QIMDNIFYEA QRQGRLSFYA TAIGEEAINI ASAAALTPQD VIFPQYREPG VLLWRGFTLQ
201: EFANQCFGNK SDYGKGRQMP VHYGSNKLNY FTVSATIATQ LPNAVGAAYS LKMDKKDACA VTYFGDGGTS EGDFHAALNI AAVMEAPVLF ICRNNGWAIS
301: TPTSDQFRSD GVVVKGRAYG IRSIRVDGND ALAMYSAVHT AREMAIREQR PILIEALTYR VGHHSTSDDS TRYRSAGEIE WWNKARNPLS RFRTWIESNG
401: WWSDKTESDL RSRIKKEMLE ALRVAEKTEK PNLQNMFSDV YDVPPSNLRE QELLVRQTIN SHPQDYPSDV PL

Arabidopsis Description

2-oxoisovalerate dehydrogenase subunit alpha 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q84JL2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.