CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 5
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH53908	Soybean	cytosol	21.1	83.33
KRG99480	Soybean	cytosol	33.54	78.33
VIT_04s0044g01490.t01	Wine grape	mitochondrion	66.46	65.49
GSMUA_Achr3P18980_001	Banana	mitochondrion	61.81	63.7
CDX81122	Canola	plastid	62.24	63.17
PGSC0003DMT400060275	Potato	mitochondrion	62.03	62.95
Solyc05g056480.2.1	Tomato	plastid	61.81	62.74
AT5G09300.1	Thale cress	plastid	62.45	62.71
Bra006017.1-P	Field mustard	plastid	61.6	62.39
CDX78354	Canola	plastid	61.81	62.08
TraesCS4B01G071500.1	Wheat	mitochondrion	60.76	61.8
TraesCS5D01G126700.1	Wheat	mitochondrion	60.97	61.62
TraesCS5B01G121400.3	Wheat	mitochondrion	60.97	61.62
TraesCS5A01G120000.3	Wheat	mitochondrion	60.76	61.41
Os12t0183100-01	Rice	mitochondrion	62.24	60.7
HORVU5Hr1G034820.3	Barley	mitochondrion	59.28	59.91
Zm00001d023694_P001	Maize	mitochondrion	61.18	59.43
KRH64579	Soybean	endoplasmic reticulum	59.92	59.41
KRH53343	Soybean	mitochondrion	60.34	58.73
KXG23145	Sorghum	mitochondrion	61.6	57.71
KRG99219	Soybean	mitochondrion	18.99	26.16
KRH45768	Soybean	mitochondrion	21.31	25.63
KRH69435	Soybean	mitochondrion	20.46	24.49
KRH74712	Soybean	mitochondrion	18.57	24.04
KRH06359	Soybean	nucleus	19.41	21.3
KRH47800	Soybean	plastid	18.99	20.83
KRH68960	Soybean	plastid	18.35	20.81
KRG97240	Soybean	plastid	18.57	20.61
KRG95283	Soybean	cytosol, mitochondrion, plastid	6.75	19.51

Protein Annotations

EMBL:ACUP02002737	EnsemblPlants:KRH64030	EnsemblPlantsGene:GLYMA_04G212100	EntrezGene:100779198	Gene3D:3.40.50.970	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016624	GO:GO:0055114	InterPro:DH_E1
InterPro:THDP-binding	PANTHER:PTHR43380	PANTHER:PTHR43380:SF2	PFAM:PF00676	ProteinID:KRH64030	ProteinID:KRH64030.1
SUPFAM:SSF52518	UniParc:UPI00023397FF	UniProt:K7KLG0	MapMan:4.2.7.2.1.1	:	:

Description

hypothetical protein

Coordinates

chr4:+:48392024..48397241

Molecular Weight (calculated)

53695.6 Da

IEP (calculated)

7.035

GRAVY (calculated)

-0.323

Length

474 amino acids

Sequence
(BLAST)

001: MRKFTTIFSH IKSTKMNFSV SLLHRSSPFC PNQPPHPNFK NLTWQNRDSL LLFPLLCSRH FASTTAQNPS TLNALQDHYQ AIDFPGGAVQ FIPEMRFISE
101: SPKERIPCYR VLDDNGQPIL GHNFVQVSKE VAVKMYTDMV TLRSMDTIFY EAQRQGRISF YVTAIGEEAI NVASAAALAM DDVVFPQYRE AGVLLWRGFT
201: LQEFANQLFS NIYDYGKGRQ MPAHYGSKKH NYFTVASTIA TQISHAVGAA YSLKMDKKDA CAVTYFGDGG SSEGDFHAAL NFAAVLEAPV IFICRNNGWA
301: ISTPISDQFR SDGVVVKGQA YGVRSIRVDG NDALAIYSAI QAARQMAITE ERPILIEALT YRVGHHTTSD DSTKYRPANE IEWWRVARDP VVRFRKWIEK
401: HGWWNDMAES ELINNLRQQL LHTIQEAEGV EKPPLADSFS DVYDVAPSNL REQEQWLKEI VRKQPQEYPT NISV

Best Arabidopsis Sequence Match ( AT5G09300.1 )
(BLAST)

001: MALHLRSSFS SKSTLLNILR HNLGFGSRSH VTRHIRQILP HDPPLRGSQN PISRLCNTMA EPETLSSFVQ HEYANNHQVM DFPGGKVAFT PEIQFISESD
101: KERVPCYRVL DDNGQLITNS QFVQVSEEVA VKIYSDMVTL QIMDNIFYEA QRQGRLSFYA TAIGEEAINI ASAAALTPQD VIFPQYREPG VLLWRGFTLQ
201: EFANQCFGNK SDYGKGRQMP VHYGSNKLNY FTVSATIATQ LPNAVGAAYS LKMDKKDACA VTYFGDGGTS EGDFHAALNI AAVMEAPVLF ICRNNGWAIS
301: TPTSDQFRSD GVVVKGRAYG IRSIRVDGND ALAMYSAVHT AREMAIREQR PILIEALTYR VGHHSTSDDS TRYRSAGEIE WWNKARNPLS RFRTWIESNG
401: WWSDKTESDL RSRIKKEMLE ALRVAEKTEK PNLQNMFSDV YDVPPSNLRE QELLVRQTIN SHPQDYPSDV PL

Arabidopsis Description

2-oxoisovalerate dehydrogenase subunit alpha 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q84JL2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.