CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 9
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH69435	Soybean	mitochondrion	94.26	87.12
Zm00001d014833_P001	Maize	cytosol, golgi	21.04	85.56
GSMUA_Achr7P05520_001	Banana	cytosol, mitochondrion	65.3	82.13
CDY31596	Canola	mitochondrion	15.03	82.09
GSMUA_Achr1P18330_001	Banana	cytosol, mitochondrion	69.67	78.7
KRH45768	Soybean	mitochondrion	82.79	76.9
CDY33613	Canola	mitochondrion	81.69	76.86
Bra035416.1-P	Field mustard	mitochondrion	81.42	76.61
CDY24500	Canola	mitochondrion	81.42	76.61
KRG99219	Soybean	mitochondrion	71.86	76.45
AT1G59900.1	Thale cress	mitochondrion	80.87	76.09
TraesCS6A01G311800.1	Wheat	golgi	76.23	75.2
PGSC0003DMT400058223	Potato	mitochondrion	79.78	74.68
Solyc05g006520.2.1	Tomato	plastid	79.78	74.68
CDY38784	Canola	mitochondrion	79.78	74.49
CDY11622	Canola	mitochondrion	79.78	74.49
PGSC0003DMT400004851	Potato	mitochondrion	78.14	73.71
CDY16236	Canola	mitochondrion	77.87	73.64
Solyc04g005080.2.1	Tomato	mitochondrion, unclear	78.42	73.4
VIT_09s0018g01940.t01	Wine grape	mitochondrion, plastid	79.78	73.37
TraesCS6B01G342000.1	Wheat	mitochondrion	77.6	73.2
Bra024643.1-P	Field mustard	mitochondrion	77.32	73.13
Os02t0739600-01	Rice	mitochondrion	77.87	73.08
TraesCS6D01G291100.1	Wheat	mitochondrion	77.32	72.94
VIT_01s0026g00990.t01	Wine grape	mitochondrion, plastid	79.23	72.86
AT1G24180.1	Thale cress	mitochondrion	78.14	72.77
Bra016238.1-P	Field mustard	mitochondrion	78.96	72.25
EES05555	Sorghum	mitochondrion	76.5	71.79
Zm00001d017985_P001	Maize	mitochondrion	76.5	71.79
Bra012418.1-P	Field mustard	mitochondrion	77.05	71.21
CDY40292	Canola	mitochondrion	76.78	71.14
CDY28458	Canola	mitochondrion	76.78	71.14
Zm00001d052289_P001	Maize	mitochondrion	75.14	70.51
HORVU6Hr1G076810.1	Barley	plastid	77.05	69.8
TraesCS7A01G238900.1	Wheat	mitochondrion	73.22	68.54
TraesCS7D01G199900.1	Wheat	golgi	73.5	68.27
Zm00001d014514_P001	Maize	cytosol, mitochondrion, plastid	25.41	67.88
Zm00001d044748_P002	Maize	mitochondrion	72.13	67.35
Os06t0246500-01	Rice	plastid	72.68	66.83
EER88157	Sorghum	mitochondrion	71.58	66.33
TraesCS7B01G103800.2	Wheat	mitochondrion	65.57	66.3
Bra017890.1-P	Field mustard	cytosol	16.12	65.56
KRG95283	Soybean	cytosol, mitochondrion, plastid	27.32	60.98
CDY14675	Canola	cytosol	72.4	60.23
CDY55064	Canola	plasma membrane	51.91	57.93
HORVU7Hr1G040460.4	Barley	mitochondrion	73.77	53.68
KRH68960	Soybean	plastid	36.34	31.82
KRG97240	Soybean	plastid	36.34	31.15
KRH47800	Soybean	plastid	36.34	30.79
KRH06359	Soybean	nucleus	36.07	30.56
KRH53908	Soybean	cytosol	8.2	25.0
KRG99480	Soybean	cytosol	11.48	20.69
KRH64030	Soybean	mitochondrion, plastid	24.04	18.57
Solyc04g025710.1.1	Tomato	cytosol	5.46	18.52
KRH53343	Soybean	mitochondrion	24.32	18.28
KRH64579	Soybean	endoplasmic reticulum	23.77	18.2
Os02t0739700-01	Rice	plastid	2.19	1.81

Protein Annotations

EMBL:ACUP02000063	EnsemblPlants:KRH74712	EnsemblPlantsGene:GLYMA_01G038000	Gene3D:3.40.50.970	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016624	GO:GO:0055114	InterPro:DH_E1	InterPro:THDP-binding
PANTHER:PTHR11516	PANTHER:PTHR11516:SF38	PFAM:PF00676	ProteinID:KRH74712	ProteinID:KRH74712.1	SUPFAM:SSF52518
UniParc:UPI000294CDEC	UniProt:K7K1M5	MapMan:2.2.1.1.1	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:4026873..4032291

Molecular Weight (calculated)

40587.6 Da

IEP (calculated)

7.125

GRAVY (calculated)

-0.313

Length

366 amino acids

Sequence
(BLAST)

001: MLLSRISHRC IGSTLTKPFS AVISTTDTPL TIETSIHSTA HNCEPPSRAV ATSSSELLTF FLDMALMRRM EIAADSLYKA KLIRGFCHLY DGQEAVAVGM
101: EAAITKMDSI ITAYRDHCTF LGRGGTLLEV FAELMGRSDG CSKGKGGSMH FYKKESGFYG KYSKDESVTF AMYGDGAANQ GQLFEALSIA ALWDLPAILV
201: CENNHYGMGT AEWRAAKSPA YYKRGDYVPG LKVDGMDVLA VKQACKFAKE HALKNGLLIL EMDTYRYHGH SMSDHGSTYR TRDEISGVRQ ERDPIERVRK
301: LLLSHDIAAE KELKDIEKEV RKEVDEAIAK AKENPMPDPS DLFTNVYIKG YGTFGADRKE VRATLP

Best Arabidopsis Sequence Match ( AT1G59900.1 )
(BLAST)

001: MALSRLSSRS NIITRPFSAA FSRLISTDTT PITIETSLPF TAHLCDPPSR SVESSSQELL DFFRTMALMR RMEIAADSLY KAKLIRGFCH LYDGQEAVAI
101: GMEAAITKKD AIITAYRDHC IFLGRGGSLH EVFSELMGRQ AGCSKGKGGS MHFYKKESSF YGGHGIVGAQ VPLGCGIAFA QKYNKEEAVT FALYGDGAAN
201: QGQLFEALNI SALWDLPAIL VCENNHYGMG TAEWRAAKSP SYYKRGDYVP GLKVDGMDAF AVKQACKFAK QHALEKGPII LEMDTYRYHG HSMSDPGSTY
301: RTRDEISGVR QERDPIERIK KLVLSHDLAT EKELKDMEKE IRKEVDDAIA KAKDCPMPEP SELFTNVYVK GFGTESFGPD RKEVKASLP

Arabidopsis Description

E1 ALPHAPyruvate dehydrogenase E1 component subunit alpha-1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P52901]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.