CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 10
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d017985_P001	Maize	mitochondrion	98.46	98.46
Os02t0739600-01	Rice	mitochondrion	93.59	93.59
TraesCS6A01G311800.1	Wheat	golgi	86.15	90.57
TraesCS6D01G291100.1	Wheat	mitochondrion	89.23	89.69
TraesCS6B01G342000.1	Wheat	mitochondrion	88.97	89.43
HORVU6Hr1G076810.1	Barley	plastid	89.49	86.39
GSMUA_Achr1P18330_001	Banana	cytosol, mitochondrion	70.26	84.57
GSMUA_Achr7P05520_001	Banana	cytosol, mitochondrion	61.79	82.82
CDY70124	Canola	cytosol	30.0	80.69
CDY31596	Canola	mitochondrion	13.85	80.6
EER88157	Sorghum	mitochondrion	80.77	79.75
Solyc05g006520.2.1	Tomato	plastid	79.23	79.03
PGSC0003DMT400058223	Potato	mitochondrion	79.23	79.03
AT1G59900.1	Thale cress	mitochondrion	78.72	78.92
KRH45768	Soybean	mitochondrion	79.23	78.43
Bra035416.1-P	Field mustard	mitochondrion	78.21	78.41
CDY24500	Canola	mitochondrion	78.21	78.41
CDY33613	Canola	mitochondrion	77.95	78.15
KRH69435	Soybean	mitochondrion	79.23	78.03
AT1G24180.1	Thale cress	mitochondrion	78.21	77.61
KRG99219	Soybean	mitochondrion	68.21	77.33
CDY16236	Canola	mitochondrion	76.67	77.26
CDY38784	Canola	mitochondrion	77.44	77.04
Bra024643.1-P	Field mustard	mitochondrion	76.15	76.74
CDY28458	Canola	mitochondrion	77.69	76.71
VIT_09s0018g01940.t01	Wine grape	mitochondrion, plastid	78.21	76.63
PGSC0003DMT400004851	Potato	mitochondrion	76.15	76.55
CDY11622	Canola	mitochondrion	76.92	76.53
KRH74712	Soybean	mitochondrion	71.79	76.5
Solyc04g005080.2.1	Tomato	mitochondrion, unclear	76.67	76.47
Bra012418.1-P	Field mustard	mitochondrion	77.44	76.26
CDY40292	Canola	mitochondrion	77.18	76.2
VIT_01s0026g00990.t01	Wine grape	mitochondrion, plastid	77.69	76.13
Bra016238.1-P	Field mustard	mitochondrion	76.41	74.5
CDY55062	Canola	cytosol	33.08	68.62
Bra017890.1-P	Field mustard	cytosol	15.38	66.67
KRG95283	Soybean	cytosol, mitochondrion, plastid	27.18	64.63
CDY14675	Canola	cytosol	71.79	63.64
CDY55064	Canola	plasma membrane	50.51	60.06
EES10385	Sorghum	plastid	36.92	33.41
KXG23145	Sorghum	mitochondrion	28.21	21.74
Os02t0739700-01	Rice	plastid	2.31	2.04

Protein Annotations

KEGG:00010+1.2.4.1	KEGG:00020+1.2.4.1	KEGG:00620+1.2.4.1	MapMan:2.2.1.1.1	Gene3D:3.40.50.970	EntrezGene:8075734
UniProt:C5XZ73	ncoils:Coil	InterPro:DH_E1	EnsemblPlants:EES05555	ProteinID:EES05555	ProteinID:EES05555.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0004739	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0006086	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016491
GO:GO:0016624	GO:GO:0043231	GO:GO:0055114	PFAM:PF00676	PANTHER:PTHR11516	PANTHER:PTHR11516:SF38
InterPro:Pyrv_DH_E1_asu_subgrp-y	EnsemblPlantsGene:SORBI_3004G244000	SUPFAM:SSF52518	unigene:Sbi.3759	InterPro:THDP-binding	TIGRFAMs:TIGR03182
UniParc:UPI0001A853C0	RefSeq:XP_002452579.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr4:+:59151172..59155693

Molecular Weight (calculated)

42648.0 Da

IEP (calculated)

8.122

GRAVY (calculated)

-0.274

Length

390 amino acids

Sequence
(BLAST)

001: MAAAALLRRI PAARAPATAF MAARPISDST AALTIETSVP FTSHLVDPPS RDVTTTPAEL VTFFRDMSLM RRMEIAADSL YKAKLIRGFC HLYDGQEAVA
101: VGMEAAITRS DSIITAYRDH CTYLARGGDL VSAFSELMGR EGGCSRGKGG SMHFYKKDAN FYGGHGIVGA QVPLGCGLAF AQKYKKEDTA TFALYGDGAA
201: NQGQLFEALN ISALWKLPAI LVCENNHYGM GTAEWRAAKS PAYYKRGDYV PGLKVDGMDV LAVKQACKFA KDHAVANGPI VLEMDTYRYH GHSMSDPGST
301: YRTRDEISGV RQERDPIERV RKLLLTHDLA TAAELKDMEK EIRKQVDDAI AKAKESSMPD TSELFTNVYK KGFGVESFGP DRKELRASLP

Best Arabidopsis Sequence Match ( AT1G59900.1 )
(BLAST)

001: MALSRLSSRS NIITRPFSAA FSRLISTDTT PITIETSLPF TAHLCDPPSR SVESSSQELL DFFRTMALMR RMEIAADSLY KAKLIRGFCH LYDGQEAVAI
101: GMEAAITKKD AIITAYRDHC IFLGRGGSLH EVFSELMGRQ AGCSKGKGGS MHFYKKESSF YGGHGIVGAQ VPLGCGIAFA QKYNKEEAVT FALYGDGAAN
201: QGQLFEALNI SALWDLPAIL VCENNHYGMG TAEWRAAKSP SYYKRGDYVP GLKVDGMDAF AVKQACKFAK QHALEKGPII LEMDTYRYHG HSMSDPGSTY
301: RTRDEISGVR QERDPIERIK KLVLSHDLAT EKELKDMEKE IRKEVDDAIA KAKDCPMPEP SELFTNVYVK GFGTESFGPD RKEVKASLP

Arabidopsis Description

E1 ALPHAPyruvate dehydrogenase E1 component subunit alpha-1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P52901]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.