Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY70124 | Canola | cytosol | 73.4 | 95.17 |
| CDY31596 | Canola | mitochondrion | 21.28 | 59.7 |
| GSMUA_Achr7P05520_001 | Banana | cytosol, mitochondrion | 68.09 | 43.99 |
| GSMUA_Achr1P18330_001 | Banana | cytosol, mitochondrion | 67.55 | 39.2 |
| CDY33613 | Canola | mitochondrion | 79.79 | 38.56 |
| CDY24500 | Canola | mitochondrion | 79.79 | 38.56 |
| TraesCS6A01G311800.1 | Wheat | golgi | 69.15 | 35.04 |
| Os02t0739600-01 | Rice | mitochondrion | 69.68 | 33.59 |
| TraesCS6D01G291100.1 | Wheat | mitochondrion | 69.15 | 33.51 |
| TraesCS6B01G342000.1 | Wheat | mitochondrion | 69.15 | 33.51 |
| CDY16236 | Canola | mitochondrion | 68.62 | 33.33 |
| CDY37428 | Canola | cytosol | 26.06 | 33.33 |
| VIT_01s0026g00990.t01 | Wine grape | mitochondrion, plastid | 70.21 | 33.17 |
| EES05555 | Sorghum | mitochondrion | 68.62 | 33.08 |
| CDY28458 | Canola | mitochondrion | 69.15 | 32.91 |
| CDY40292 | Canola | mitochondrion | 69.15 | 32.91 |
| CDY11622 | Canola | mitochondrion | 68.62 | 32.91 |
| CDY38784 | Canola | mitochondrion | 68.62 | 32.91 |
| Zm00001d017985_P001 | Maize | mitochondrion | 68.09 | 32.82 |
| Zm00001d052289_P001 | Maize | mitochondrion | 67.55 | 32.56 |
| Solyc05g006520.2.1 | Tomato | plastid | 67.02 | 32.23 |
| PGSC0003DMT400058223 | Potato | mitochondrion | 67.02 | 32.23 |
| HORVU6Hr1G076810.1 | Barley | plastid | 69.15 | 32.18 |
| VIT_09s0018g01940.t01 | Wine grape | mitochondrion, plastid | 67.55 | 31.91 |
| Solyc04g005080.2.1 | Tomato | mitochondrion, unclear | 65.43 | 31.46 |
| Zm00001d044748_P002 | Maize | mitochondrion | 65.43 | 31.38 |
| PGSC0003DMT400004851 | Potato | mitochondrion | 64.36 | 31.19 |
| TraesCS7A01G238900.1 | Wheat | mitochondrion | 64.36 | 30.95 |
| TraesCS7D01G199900.1 | Wheat | golgi | 64.36 | 30.71 |
| Os06t0246500-01 | Rice | plastid | 64.89 | 30.65 |
| EER88157 | Sorghum | mitochondrion | 63.83 | 30.38 |
| CDY14675 | Canola | cytosol | 68.62 | 29.32 |
| Zm00001d014833_P001 | Maize | cytosol, golgi | 13.3 | 27.78 |
| TraesCS7B01G103800.2 | Wheat | mitochondrion | 47.87 | 24.86 |
| HORVU7Hr1G040460.4 | Barley | mitochondrion | 64.36 | 24.06 |
| Zm00001d014514_P001 | Maize | cytosol, mitochondrion, plastid | 13.83 | 18.98 |
| CDY37473 | Canola | plastid | 32.45 | 14.42 |
| CDY32445 | Canola | plastid | 32.45 | 14.35 |
| CDX90009 | Canola | plastid | 32.45 | 14.32 |
| CDY15202 | Canola | plastid | 32.45 | 14.22 |
| CDX81122 | Canola | plastid | 26.6 | 10.71 |
| CDX96593 | Canola | mitochondrion | 26.6 | 10.62 |
| CDX78354 | Canola | plastid | 26.6 | 10.59 |
| CDY65512 | Canola | mitochondrion | 26.6 | 10.59 |
| CDY50237 | Canola | mitochondrion | 26.6 | 10.59 |
| CDY65109 | Canola | mitochondrion | 25.53 | 10.15 |
| CDY55064 | Canola | plasma membrane | 12.77 | 7.32 |
| CDY37427 | Canola | cytosol, mitochondrion, plastid | 4.79 | 5.84 |
| Solyc04g025710.1.1 | Tomato | cytosol | 3.19 | 5.56 |
| Os02t0739700-01 | Rice | plastid | 0.0 | 0.0 |
Protein Annotations
| Gene3D:3.40.50.970 | MapMan:35.1 | GO:A0A078IXR3 | UniProt:A0A078IXR3 | EnsemblPlants:CDY55062 | ProteinID:CDY55062 |
| ProteinID:CDY55062.1 | ncoils:Coil | InterPro:DH_E1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016624 | GO:GO:0055114 | EnsemblPlantsGene:GSBRNA2T00015018001 | PFAM:PF00676 | PANTHER:PTHR11516 |
| PANTHER:PTHR11516:SF38 | SUPFAM:SSF52518 | InterPro:THDP-binding | UniParc:UPI0004EEFDE4 | : | : |
Description
BnaCnng28160DBnaCnng28160D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IXR3]
Coordinates
chrLK033374:-:13497..15659
Molecular Weight (calculated)
21362.4 Da
IEP (calculated)
6.522
GRAVY (calculated)
-0.751
Length
188 amino acids
Sequence
(BLAST)
(BLAST)
001: MAENMKWVRY GLQETASKGR RECMDSCRID VSEELGRYVA TERNATERDV CSVDGMDAFA VKQACKFAKE HALKNGPIIL EMDTYRYHGH SMSDPGSTYR
101: TRDEISGVRQ ERDPIERIKK LVLSHDLATE KELKDMEKEI RKEVDDAIAK AKDCSMPEPS ELFTNVYVKG FGTKSFGADR KEVKAALP
101: TRDEISGVRQ ERDPIERIKK LVLSHDLATE KELKDMEKEI RKEVDDAIAK AKDCSMPEPS ELFTNVYVKG FGTKSFGADR KEVKAALP
001: MALSRLSSRS NTFLKPAITA LPSSIRRHVS TDSSPITIET AVPFTSHLCE SPSRSVETSS EEILAFFRDM ARMRRMEIAA DSLYKAKLIR GFCHLYDGQE
101: ALAVGMEAAI TKKDAIITSY RDHCTFIGRG GKLVDAFSEL MGRKTGCSHG KGGSMHFYKK DASFYGGHGI VGAQIPLGCG LAFAQKYNKD EAVTFALYGD
201: GAANQGQLFE ALNISALWDL PAILVCENNH YGMGTATWRS AKSPAYFKRG DYVPGLKVDG MDALAVKQAC KFAKEHALKN GPIILEMDTY RYHGHSMSDP
301: GSTYRTRDEI SGVRQVRDPI ERVRKLLLTH DIATEKELKD MEKEIRKEVD DAVAQAKESP IPDASELFTN MYVKDCGVES FGADRKELKV TLP
101: ALAVGMEAAI TKKDAIITSY RDHCTFIGRG GKLVDAFSEL MGRKTGCSHG KGGSMHFYKK DASFYGGHGI VGAQIPLGCG LAFAQKYNKD EAVTFALYGD
201: GAANQGQLFE ALNISALWDL PAILVCENNH YGMGTATWRS AKSPAYFKRG DYVPGLKVDG MDALAVKQAC KFAKEHALKN GPIILEMDTY RYHGHSMSDP
301: GSTYRTRDEI SGVRQVRDPI ERVRKLLLTH DIATEKELKD MEKEIRKEVD DAVAQAKESP IPDASELFTN MYVKDCGVES FGADRKELKV TLP
Arabidopsis Description
IAR4Pyruvate dehydrogenase E1 component subunit alpha-2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8H1Y0]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.