CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 8

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d044748_P002	Maize	mitochondrion	93.42	94.13
TraesCS7D01G199900.1	Wheat	golgi	88.86	89.09
TraesCS7A01G238900.1	Wheat	mitochondrion	87.85	88.75
Os06t0246500-01	Rice	plastid	88.86	88.19
TraesCS7B01G103800.2	Wheat	mitochondrion	80.25	87.57
GSMUA_Achr1P18330_001	Banana	cytosol, mitochondrion	69.37	84.57
GSMUA_Achr7P05520_001	Banana	cytosol, mitochondrion	61.01	82.82
CDY31596	Canola	mitochondrion	13.92	82.09
EES05555	Sorghum	mitochondrion	79.75	80.77
KRG99219	Soybean	mitochondrion	66.08	75.87
Bra035416.1-P	Field mustard	mitochondrion	74.43	75.58
CDY24500	Canola	mitochondrion	74.43	75.58
CDY38784	Canola	mitochondrion	74.94	75.51
CDY33613	Canola	mitochondrion	74.18	75.32
PGSC0003DMT400058223	Potato	mitochondrion	74.43	75.19
Solyc05g006520.2.1	Tomato	plastid	74.43	75.19
KRH45768	Soybean	mitochondrion	74.94	75.13
CDY11622	Canola	mitochondrion	74.18	74.74
CDY70124	Canola	cytosol	27.34	74.48
CDY16236	Canola	mitochondrion	72.66	74.16
AT1G59900.1	Thale cress	mitochondrion	72.91	74.04
KRH69435	Soybean	mitochondrion	74.18	73.99
Bra024643.1-P	Field mustard	mitochondrion	72.15	73.64
PGSC0003DMT400004851	Potato	mitochondrion	72.15	73.45
CDY40292	Canola	mitochondrion	73.42	73.42
CDY28458	Canola	mitochondrion	73.42	73.42
VIT_09s0018g01940.t01	Wine grape	mitochondrion, plastid	73.92	73.37
Bra012418.1-P	Field mustard	mitochondrion	73.42	73.23
Solyc04g005080.2.1	Tomato	mitochondrion, unclear	72.41	73.15
AT1G24180.1	Thale cress	mitochondrion	72.66	73.03
Bra016238.1-P	Field mustard	mitochondrion	73.92	73.0
VIT_01s0026g00990.t01	Wine grape	mitochondrion, plastid	72.41	71.86
KRH74712	Soybean	mitochondrion	66.33	71.58
Bra017890.1-P	Field mustard	cytosol	15.95	70.0
HORVU7Hr1G040460.4	Barley	mitochondrion	88.86	69.78
CDY55062	Canola	cytosol	30.38	63.83
KRG95283	Soybean	cytosol, mitochondrion, plastid	25.82	62.2
CDY14675	Canola	cytosol	67.59	60.68
CDY55064	Canola	plasma membrane	48.86	58.84
EES10385	Sorghum	plastid	36.71	33.64
KXG23145	Sorghum	mitochondrion	26.08	20.36

Protein Annotations

KEGG:00010+1.2.4.1	KEGG:00020+1.2.4.1	KEGG:00620+1.2.4.1	MapMan:2.2.1.1.1	Gene3D:3.40.50.970	EntrezGene:8065712
UniProt:C5Z7K8	ncoils:Coil	InterPro:DH_E1	EnsemblPlants:EER88157	ProteinID:EER88157	ProteinID:EER88157.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0004739	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0006086	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016491
GO:GO:0016624	GO:GO:0043231	GO:GO:0055114	ProteinID:OQU76159.1	PFAM:PF00676	PANTHER:PTHR11516
PANTHER:PTHR11516:SF38	InterPro:Pyrv_DH_E1_asu_subgrp-y	EnsemblPlantsGene:SORBI_3010G101300	SUPFAM:SSF52518	unigene:Sbi.10295	InterPro:THDP-binding
TIGRFAMs:TIGR03182	UniParc:UPI0001A89451	RefSeq:XP_002436790.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr10:+:9338101..9344284

Molecular Weight (calculated)

43420.2 Da

IEP (calculated)

8.266

GRAVY (calculated)

-0.199

Length

395 amino acids

Sequence
(BLAST)

001: MAGAILRRLT PTAATSPRVA PLLPLLVARG VSDSTDAITV ETSVPFKSHI VDAPSREATT TARELLSFFR DMSLMRRAEI AADSLYKAKL IRGFCHLYDG
101: QEAVAVGMEA AITRADAIIT AYRDHCAYLA RGGDLVAAFA ELMGRRDGCS RGKGGSMHFY KRDANFFGGH GIVGAQVPLG CGIAFAQRYR KEGTVTFDLY
201: GDGAANQGQL FEALNMAALW KLPVVLVCEN NHYGMGTAEW RASKSPAYYK RGDYVPGLKV DGMDVLAVKQ ACKFAKEHVL ENGPIILEMD TYRYHGHSMS
301: DPGSTYRTRN EIAGIRQERD PIERVRKLIL AHEFATAQEL KDMEKEIRKQ VDAAIAKAKE SPMPDPSELF TNVYVNDCGL ESFGVDRKVV RTVLP

Best Arabidopsis Sequence Match ( AT1G24180.1 )
(BLAST)

001: MALSRLSSRS NTFLKPAITA LPSSIRRHVS TDSSPITIET AVPFTSHLCE SPSRSVETSS EEILAFFRDM ARMRRMEIAA DSLYKAKLIR GFCHLYDGQE
101: ALAVGMEAAI TKKDAIITSY RDHCTFIGRG GKLVDAFSEL MGRKTGCSHG KGGSMHFYKK DASFYGGHGI VGAQIPLGCG LAFAQKYNKD EAVTFALYGD
201: GAANQGQLFE ALNISALWDL PAILVCENNH YGMGTATWRS AKSPAYFKRG DYVPGLKVDG MDALAVKQAC KFAKEHALKN GPIILEMDTY RYHGHSMSDP
301: GSTYRTRDEI SGVRQVRDPI ERVRKLLLTH DIATEKELKD MEKEIRKEVD DAVAQAKESP IPDASELFTN MYVKDCGVES FGADRKELKV TLP

Arabidopsis Description

IAR4Pyruvate dehydrogenase E1 component subunit alpha-2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8H1Y0]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.