Factsheet for Bra024643.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 9
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY16236	Canola	mitochondrion	99.48	99.48
Bra012418.1-P	Field mustard	mitochondrion	95.35	93.18
AT1G24180.1	Thale cress	mitochondrion	91.47	90.08
Zm00001d014833_P001	Maize	cytosol, golgi	19.9	85.56
Bra016238.1-P	Field mustard	mitochondrion	85.01	82.25
GSMUA_Achr7P05520_001	Banana	cytosol, mitochondrion	61.76	82.13
GSMUA_Achr1P18330_001	Banana	cytosol, mitochondrion	68.22	81.48
Bra035416.1-P	Field mustard	mitochondrion	81.4	80.98
TraesCS6A01G311800.1	Wheat	golgi	77.0	80.32
KRH69435	Soybean	mitochondrion	80.88	79.04
KRG99219	Soybean	mitochondrion	70.03	78.78
TraesCS6B01G342000.1	Wheat	mitochondrion	78.04	77.84
TraesCS6D01G291100.1	Wheat	mitochondrion	78.04	77.84
Os02t0739600-01	Rice	mitochondrion	78.29	77.69
KRH45768	Soybean	mitochondrion	79.07	77.67
KRH74712	Soybean	mitochondrion	73.13	77.32
Zm00001d017985_P001	Maize	mitochondrion	77.26	76.67
EES05555	Sorghum	mitochondrion	76.74	76.15
PGSC0003DMT400058223	Potato	mitochondrion	76.74	75.96
Solyc05g006520.2.1	Tomato	plastid	76.49	75.7
TraesCS7A01G238900.1	Wheat	mitochondrion	75.97	75.19
Zm00001d052289_P001	Maize	mitochondrion	75.71	75.13
VIT_01s0026g00990.t01	Wine grape	mitochondrion, plastid	77.26	75.13
TraesCS7D01G199900.1	Wheat	golgi	76.23	74.87
VIT_09s0018g01940.t01	Wine grape	mitochondrion, plastid	76.74	74.62
HORVU6Hr1G076810.1	Barley	plastid	77.78	74.5
TraesCS7B01G103800.2	Wheat	mitochondrion	68.48	73.2
PGSC0003DMT400004851	Potato	mitochondrion	73.13	72.94
Solyc04g005080.2.1	Tomato	mitochondrion, unclear	73.64	72.89
Zm00001d044748_P002	Maize	mitochondrion	73.64	72.7
EER88157	Sorghum	mitochondrion	73.64	72.15
Os06t0246500-01	Rice	plastid	73.64	71.61
Zm00001d014514_P001	Maize	cytosol, mitochondrion, plastid	24.55	69.34
Bra017890.1-P	Field mustard	cytosol	15.76	67.78
KRG95283	Soybean	cytosol, mitochondrion, plastid	27.39	64.63
HORVU7Hr1G040460.4	Barley	mitochondrion	76.23	58.65
Bra032619.1-P	Field mustard	plastid	35.4	32.24
Bra033286.1-P	Field mustard	plastid	35.14	31.92
Bra016423.1-P	Field mustard	mitochondrion	24.03	19.75
Bra006017.1-P	Field mustard	plastid	23.77	19.66
Bra017912.1-P	Field mustard	mitochondrion	23.77	19.49
Solyc04g025710.1.1	Tomato	cytosol	4.39	15.74
Os02t0739700-01	Rice	plastid	2.58	2.27

Protein Annotations

KEGG:00010+1.2.4.1	KEGG:00020+1.2.4.1	KEGG:00620+1.2.4.1	MapMan:2.2.1.1.1	Gene3D:3.40.50.970	EnsemblPlantsGene:Bra024643
EnsemblPlants:Bra024643.1	EnsemblPlants:Bra024643.1-P	InterPro:DH_E1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004739
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006086	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0016491	GO:GO:0016624	GO:GO:0043231	GO:GO:0055114
UniProt:M4E788	PFAM:PF00676	PANTHER:PTHR11516	PANTHER:PTHR11516:SF38	InterPro:Pyrv_DH_E1_asu_subgrp-y	SUPFAM:SSF52518
InterPro:THDP-binding	TIGRFAMs:TIGR03182	UniParc:UPI0002542194	SEG:seg	:	:

Description

AT1G24180 (E=7e-195) IAR4 | IAR4; oxidoreductase, acting on the aldehyde or oxo group of donors, disulfide as acceptor / pyruvate dehydrogenase (acetyl-transferring)

Coordinates

chrA09:+:23857841..23859755

Molecular Weight (calculated)

42818.2 Da

IEP (calculated)

7.756

GRAVY (calculated)

-0.331

Length

387 amino acids

Sequence
(BLAST)

001: MALSRLSLRS TTFLKPSSLR RHVTTDTTPI TIETAAPFTS HQCDPPSRSV ETSSAEILSF FRDMARMRRM EIAADSLYKS KLIRGFCHLY DGQEALAVGM
101: EAAITKKDAI ITSYRDHCTF LGRGGELVDA FSELMGRMRG CSNGKGGSMH FYKKDACFYG GHGIVGAQIP LGCGLAFAQK YSKEENVSFV LYGDGAANQG
201: QLFEALNIAA LWDLPAILVC ENNHYGMGTA TWRSAKSPAY FKRGDYVPGL KVDGMDVLAV KQACKFAKEH ALKNGPIILE MDTYRYHGHS MSDPGSTYRT
301: RDEVSGVRQV RDPIERARKL LLSHDIATEK ELKDMEKEVR KEVDDAVAQA KESPVPEASE LFTNMYVKDC GVESFGADRK ELKVTLA

Best Arabidopsis Sequence Match ( AT1G24180.1 )
(BLAST)

001: MALSRLSSRS NTFLKPAITA LPSSIRRHVS TDSSPITIET AVPFTSHLCE SPSRSVETSS EEILAFFRDM ARMRRMEIAA DSLYKAKLIR GFCHLYDGQE
101: ALAVGMEAAI TKKDAIITSY RDHCTFIGRG GKLVDAFSEL MGRKTGCSHG KGGSMHFYKK DASFYGGHGI VGAQIPLGCG LAFAQKYNKD EAVTFALYGD
201: GAANQGQLFE ALNISALWDL PAILVCENNH YGMGTATWRS AKSPAYFKRG DYVPGLKVDG MDALAVKQAC KFAKEHALKN GPIILEMDTY RYHGHSMSDP
301: GSTYRTRDEI SGVRQVRDPI ERVRKLLLTH DIATEKELKD MEKEIRKEVD DAVAQAKESP IPDASELFTN MYVKDCGVES FGADRKELKV TLP

Arabidopsis Description

IAR4Pyruvate dehydrogenase E1 component subunit alpha-2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8H1Y0]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.