Factsheet for TraesCS6B01G342000.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 7

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

mitochondrion: 23895732

msms PMID: 23895732 doi

RP Jacoby, AH Millar, NL Taylor

ARC Centre of Excellence in Plant Energy Biology & Centre for Comparative Analysis of Biomolecular Networks (CABiN), M316, The University of Western Australia , 35 Stirling Highway, Crawley, WA 6009, Australia.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G311800.1	Wheat	golgi	95.36	99.73
TraesCS6D01G291100.1	Wheat	mitochondrion	99.48	99.48
HORVU6Hr1G076810.1	Barley	plastid	98.97	95.05
Os02t0739600-01	Rice	mitochondrion	91.24	90.77
EES05555	Sorghum	mitochondrion	89.43	88.97
Zm00001d017985_P001	Maize	mitochondrion	89.18	88.72
Zm00001d052289_P001	Maize	mitochondrion	88.14	87.69
GSMUA_Achr1P18330_001	Banana	cytosol, mitochondrion	70.88	84.88
GSMUA_Achr7P05520_001	Banana	cytosol, mitochondrion	63.14	84.19
CDY31596	Canola	mitochondrion	14.43	83.58
CDY70124	Canola	cytosol	30.67	82.07
CDY24500	Canola	mitochondrion	81.19	80.98
Bra035416.1-P	Field mustard	mitochondrion	81.19	80.98
CDY33613	Canola	mitochondrion	80.93	80.72
Solyc05g006520.2.1	Tomato	plastid	80.67	80.05
PGSC0003DMT400058223	Potato	mitochondrion	80.67	80.05
KRH69435	Soybean	mitochondrion	81.7	80.05
AT1G59900.1	Thale cress	mitochondrion	79.9	79.69
TraesCS7B01G103800.2	Wheat	mitochondrion	73.97	79.28
KRH45768	Soybean	mitochondrion	80.15	78.93
CDY16236	Canola	mitochondrion	78.35	78.55
CDY38784	Canola	mitochondrion	79.12	78.32
CDY11622	Canola	mitochondrion	78.87	78.06
Bra024643.1-P	Field mustard	mitochondrion	77.84	78.04
KRH74712	Soybean	mitochondrion	73.2	77.6
AT1G24180.1	Thale cress	mitochondrion	78.35	77.35
KRG99219	Soybean	mitochondrion	68.56	77.33
PGSC0003DMT400004851	Potato	mitochondrion	77.32	77.32
Solyc04g005080.2.1	Tomato	mitochondrion, unclear	77.84	77.24
CDY28458	Canola	mitochondrion	77.84	76.46
Bra012418.1-P	Field mustard	mitochondrion	77.58	76.01
CDY40292	Canola	mitochondrion	77.32	75.95
Bra016238.1-P	Field mustard	mitochondrion	78.09	75.75
VIT_01s0026g00990.t01	Wine grape	mitochondrion, plastid	77.32	75.38
VIT_09s0018g01940.t01	Wine grape	mitochondrion, plastid	77.06	75.13
CDY55062	Canola	cytosol	33.51	69.15
Bra017890.1-P	Field mustard	cytosol	15.98	68.89
CDY14675	Canola	cytosol	72.94	64.32
CDY55064	Canola	plasma membrane	52.58	62.2
KRG95283	Soybean	cytosol, mitochondrion, plastid	26.03	61.59
TraesCS2B01G012500.1	Wheat	plastid	37.37	34.44
TraesCS5B01G121400.3	Wheat	mitochondrion	27.06	22.39
TraesCS4B01G071500.1	Wheat	mitochondrion	26.55	22.1
Os02t0739700-01	Rice	plastid	2.84	2.49

Protein Annotations

KEGG:00010+1.2.4.1	KEGG:00020+1.2.4.1	KEGG:00620+1.2.4.1	MapMan:2.2.1.1.1	Gene3D:3.40.50.970	InterPro:DH_E1
GO:GO:0003674	GO:GO:0003824	GO:GO:0004739	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0006086	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016624
GO:GO:0043231	PFAM:PF00676	PANTHER:PTHR11516	PANTHER:PTHR11516:SF38	InterPro:Pyrv_DH_E1_asu_subgrp-y	SUPFAM:SSF52518
InterPro:THDP-binding	TIGRFAMs:TIGR03182	EnsemblPlantsGene:TraesCS6B01G342000	EnsemblPlants:TraesCS6B01G342000.1	TIGR:cd02000	SEG:seg

Description

No Description!

Coordinates

chr6B:+:601880291..601884013

Molecular Weight (calculated)

42571.3 Da

IEP (calculated)

8.067

GRAVY (calculated)

-0.213

Length

388 amino acids

Sequence
(BLAST)

001: MAAAMLLRRL PAARPPLMAA TRAISDSTAP LTIETSMPFT AHIVDPPSRD VATTPAELVA FFHDMSLMRR MEIAADSLYK AKLIRGFCHL YDGQEAVCAG
101: MEAAITRKDS IITAYRDHCI FLSRGGDLVT AFAELMGRQV GCSRGKGGSM HFYKKDANFY GGHGIVGAQV PLGCGLAFAQ KYRKEDSVSF SLYGDGAANQ
201: GQLFEALNIS ALWKLPAILV CENNHYGMGT AEWRAAKSPS YYKRGDYVPG LKVDGMDVLA VKQACKFAKE HAIANGPIVL EMDTYRYHGH SMSDPGSTYR
301: TRDEISGVRQ ERDPIERVRK LLLAHDLATP AELKDMEKEI RKEVDAAIAK AKESPMPDAS ELFTNVYVKG FGVESFGADR KELRATLP

Best Arabidopsis Sequence Match ( AT1G59900.1 )
(BLAST)

001: MALSRLSSRS NIITRPFSAA FSRLISTDTT PITIETSLPF TAHLCDPPSR SVESSSQELL DFFRTMALMR RMEIAADSLY KAKLIRGFCH LYDGQEAVAI
101: GMEAAITKKD AIITAYRDHC IFLGRGGSLH EVFSELMGRQ AGCSKGKGGS MHFYKKESSF YGGHGIVGAQ VPLGCGIAFA QKYNKEEAVT FALYGDGAAN
201: QGQLFEALNI SALWDLPAIL VCENNHYGMG TAEWRAAKSP SYYKRGDYVP GLKVDGMDAF AVKQACKFAK QHALEKGPII LEMDTYRYHG HSMSDPGSTY
301: RTRDEISGVR QERDPIERIK KLVLSHDLAT EKELKDMEKE IRKEVDDAIA KAKDCPMPEP SELFTNVYVK GFGTESFGPD RKEVKASLP

Arabidopsis Description

E1 ALPHAPyruvate dehydrogenase E1 component subunit alpha-1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P52901]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.