Factsheet for TraesCS5B01G121400.3

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G071500.1	Wheat	mitochondrion	98.08	98.71
TraesCS5D01G126700.1	Wheat	mitochondrion	98.29	98.29
TraesCS5A01G120000.3	Wheat	mitochondrion	98.29	98.29
HORVU5Hr1G034820.3	Barley	mitochondrion	94.88	94.88
Os12t0183100-01	Rice	mitochondrion	83.8	80.86
Zm00001d023694_P001	Maize	mitochondrion	82.73	79.51
KXG23145	Sorghum	mitochondrion	82.09	76.09
Solyc06g059850.1.1	Tomato	cytosol	58.64	72.37
GSMUA_Achr3P18980_001	Banana	mitochondrion	70.79	72.17
Bra006017.1-P	Field mustard	plastid	63.11	63.25
VIT_18s0001g14980.t01	Wine grape	plastid	63.33	63.06
CDX81122	Canola	plastid	62.47	62.74
AT5G09300.1	Thale cress	plastid	63.11	62.71
KRH53908	Soybean	cytosol	15.99	62.5
CDX78354	Canola	plastid	62.9	62.5
VIT_04s0044g01490.t01	Wine grape	mitochondrion	63.33	61.75
KRG99480	Soybean	cytosol	26.44	61.08
Solyc04g063350.2.1	Tomato	mitochondrion	61.41	61.02
KRH64030	Soybean	mitochondrion, plastid	61.62	60.97
PGSC0003DMT400060275	Potato	mitochondrion	60.34	60.6
CDY65512	Canola	mitochondrion	60.98	60.59
KRH64579	Soybean	endoplasmic reticulum	61.62	60.46
Bra017912.1-P	Field mustard	mitochondrion	60.77	60.38
CDY50237	Canola	mitochondrion	60.77	60.38
Solyc05g056480.2.1	Tomato	plastid	59.91	60.17
PGSC0003DMT400063962	Potato	mitochondrion, plastid	60.13	59.87
Bra016423.1-P	Field mustard	mitochondrion	59.91	59.66
CDX96593	Canola	mitochondrion	59.91	59.66
KRH53343	Soybean	mitochondrion	61.83	59.55
CDY65109	Canola	mitochondrion	59.7	59.2
PGSC0003DMT400033905	Potato	mitochondrion	57.36	58.99
Solyc06g059840.2.1	Tomato	mitochondrion	57.14	58.77
Solyc12g055890.1.1	Tomato	mitochondrion	36.67	57.91
Solyc12g055880.1.1	Tomato	cytosol	16.63	57.78
PGSC0003DMT400012840	Potato	cytosol, mitochondrion, plasma membrane	33.48	57.51
AT1G21400.5	Thale cress	plastid	62.05	55.53
AT5G34780.1	Thale cress	cytosol, mitochondrion	32.62	41.92
TraesCS6B01G342000.1	Wheat	mitochondrion	22.39	27.06
TraesCS7B01G103800.2	Wheat	mitochondrion	19.19	24.86
TraesCS2B01G012500.1	Wheat	plastid	19.62	21.85

Protein Annotations

EnsemblPlants:TraesCS5B01G121400.3	EnsemblPlantsGene:TraesCS5B01G121400	Gene3D:3.40.50.970	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016624	InterPro:DH_E1	InterPro:THDP-binding	PANTHER:PTHR43380	PANTHER:PTHR43380:SF2
PFAM:PF00676	SEG:seg	SUPFAM:SSF52518	TIGR:cd02000	MapMan:4.2.7.2.1.1	:

Description

No Description!

Coordinates

chr5B:+:216650268..216653025

Molecular Weight (calculated)

52234.6 Da

IEP (calculated)

6.523

GRAVY (calculated)

-0.388

Length

469 amino acids

Sequence
(BLAST)

001: MAAWLARRAA RRLASELRSR GPGPWPLSSS TVLVLGVPSG DQSRGFCSVR RFAGDSAAAA AVEEPENGLA AGDLQFVDFP GGKLSFVGEM NFLPESQRER
101: INCYRVLDDD GGTIYSSRFQ EVSKELALKM YSNMVTLQIM DTIFYEAQRQ GRISFYLTSN GEEAINIASA AALSAQDIVL PQYREPGVLL WRGFTLQEFA
201: NQLFGNKLDY GKGRQMPIHY GSNRLNYFTV SSPIATQLPQ AVGAAYSLKM DKKKACAITY FGDGGTSEGD FHAALNFAAV TEAPVIFFCR NNGWAISTPT
301: AEQFRSDGVV TRGQAYGIRS IRVDGNDTLA VYSAVHTARE MAITEGRPIL IEAMTYRVGH HSTSDDSTKY RPADEMEHWR TARDPVSRYR KWVQGNGWWC
401: DTQESELRNN VRQELLQAIQ VAERMPKHGL AELFTDVYDQ MPSNLREQER SLLDTIKKHP AEYPADVPA

Best Arabidopsis Sequence Match ( AT5G09300.1 )
(BLAST)

001: MALHLRSSFS SKSTLLNILR HNLGFGSRSH VTRHIRQILP HDPPLRGSQN PISRLCNTMA EPETLSSFVQ HEYANNHQVM DFPGGKVAFT PEIQFISESD
101: KERVPCYRVL DDNGQLITNS QFVQVSEEVA VKIYSDMVTL QIMDNIFYEA QRQGRLSFYA TAIGEEAINI ASAAALTPQD VIFPQYREPG VLLWRGFTLQ
201: EFANQCFGNK SDYGKGRQMP VHYGSNKLNY FTVSATIATQ LPNAVGAAYS LKMDKKDACA VTYFGDGGTS EGDFHAALNI AAVMEAPVLF ICRNNGWAIS
301: TPTSDQFRSD GVVVKGRAYG IRSIRVDGND ALAMYSAVHT AREMAIREQR PILIEALTYR VGHHSTSDDS TRYRSAGEIE WWNKARNPLS RFRTWIESNG
401: WWSDKTESDL RSRIKKEMLE ALRVAEKTEK PNLQNMFSDV YDVPPSNLRE QELLVRQTIN SHPQDYPSDV PL

Arabidopsis Description

2-oxoisovalerate dehydrogenase subunit alpha 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q84JL2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.