Factsheet for HORVU5Hr1G034820.3

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G121400.3	Wheat	mitochondrion	94.88	94.88
TraesCS5A01G120000.3	Wheat	mitochondrion	94.67	94.67
TraesCS5D01G126700.1	Wheat	mitochondrion	94.46	94.46
TraesCS4B01G071500.1	Wheat	mitochondrion	93.39	93.99
Os12t0183100-01	Rice	mitochondrion	81.45	78.6
Zm00001d023694_P001	Maize	mitochondrion	81.02	77.87
KXG23145	Sorghum	mitochondrion	80.17	74.31
Solyc06g059850.1.1	Tomato	cytosol	58.21	71.84
GSMUA_Achr3P18980_001	Banana	mitochondrion	69.08	70.43
KRH53908	Soybean	cytosol	16.2	63.33
VIT_18s0001g14980.t01	Wine grape	plastid	62.47	62.21
Bra006017.1-P	Field mustard	plastid	61.83	61.97
CDX81122	Canola	plastid	61.62	61.88
AT5G09300.1	Thale cress	plastid	62.05	61.65
CDX78354	Canola	plastid	61.62	61.23
VIT_04s0044g01490.t01	Wine grape	mitochondrion	62.47	60.91
KRG99480	Soybean	cytosol	26.23	60.59
Solyc04g063350.2.1	Tomato	mitochondrion	60.13	59.75
CDY65512	Canola	mitochondrion	59.91	59.53
Bra017912.1-P	Field mustard	mitochondrion	59.7	59.32
CDY50237	Canola	mitochondrion	59.7	59.32
KRH64030	Soybean	mitochondrion, plastid	59.91	59.28
CDX96593	Canola	mitochondrion	59.28	59.02
PGSC0003DMT400063962	Potato	mitochondrion, plastid	59.28	59.02
PGSC0003DMT400060275	Potato	mitochondrion	58.64	58.89
Solyc05g056480.2.1	Tomato	plastid	58.64	58.89
Bra016423.1-P	Field mustard	mitochondrion	59.06	58.81
KRH64579	Soybean	endoplasmic reticulum	59.7	58.58
CDY65109	Canola	mitochondrion	58.64	58.14
KRH53343	Soybean	mitochondrion	60.34	58.11
PGSC0003DMT400033905	Potato	mitochondrion	56.29	57.89
Solyc06g059840.2.1	Tomato	mitochondrion	56.08	57.68
Solyc12g055890.1.1	Tomato	mitochondrion	36.46	57.58
PGSC0003DMT400012840	Potato	cytosol, mitochondrion, plasma membrane	33.05	56.78
Solyc12g055880.1.1	Tomato	cytosol	16.2	56.3
AT1G21400.5	Thale cress	plastid	61.19	54.77
AT5G34780.1	Thale cress	cytosol, mitochondrion	31.34	40.27
HORVU2Hr1G086290.1	Barley	extracellular, vacuole	7.04	32.04
HORVU6Hr1G076810.1	Barley	plastid	22.39	25.99
HORVU2Hr1G001600.1	Barley	plastid	19.83	20.35
HORVU7Hr1G040460.4	Barley	mitochondrion	21.54	20.08

Protein Annotations

EnsemblPlants:HORVU5Hr1G034820.3	EnsemblPlantsGene:HORVU5Hr1G034820	Gene3D:3.40.50.970	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016624	GO:GO:0055114	InterPro:DH_E1	InterPro:THDP-binding	PANTHER:PTHR43380
PANTHER:PTHR43380:SF2	PFAM:PF00676	SEG:seg	SUPFAM:SSF52518	UniParc:UPI000B46169C	UniProt:A0A287QUF4
MapMan:4.2.7.2.1.1	:	:	:	:	:

Description

No Description!

Coordinates

chrchr5H:-:236654948..236659517

Molecular Weight (calculated)

52057.6 Da

IEP (calculated)

7.494

GRAVY (calculated)

-0.349

Length

469 amino acids

Sequence
(BLAST)

001: MAAWLVRRAA RRVAGELRGR GPGPWSLSSS TVPVLGVPAV DQSRAFCSVR RFAGDSAAAA AVEEPENGLA AGGLQCVDFP GGKLSFVGEM NFLPESQTER
101: INCYRVLDDD GGTIYNSRFQ EVSKDLALKM YSNMVTLQIM DTIFYEAQRQ GRISFYLTSN GEEAINIASA AALSAQDIVL PQYREPGVLL WRGFTLQEFA
201: NQLFGNKLDY GKGRQMPIHY GSNRLNYFTV SSPIATQLPQ AVGAAYSLKM DKKKACAITY FGDGGTSEGD FHAALNFAAV AEAPMIFFCR NNGWAISTPT
301: AEQFRSDGVV TRGQAYGIRS IRLDGNDTLA VYSAVHTARE MAITEGRPIL IEAMTYRVGH HSTSDDSTKY RPADEMEHWR TARDPVSRYR KWVQGNGWWC
401: DTQESQLRNN VRQELLQAIQ VAERMPKHGL AELFTDVYDQ IPSNLRQQGR SLLDTIKRRP AEYPADVPV

Best Arabidopsis Sequence Match ( AT5G09300.1 )
(BLAST)

001: MALHLRSSFS SKSTLLNILR HNLGFGSRSH VTRHIRQILP HDPPLRGSQN PISRLCNTMA EPETLSSFVQ HEYANNHQVM DFPGGKVAFT PEIQFISESD
101: KERVPCYRVL DDNGQLITNS QFVQVSEEVA VKIYSDMVTL QIMDNIFYEA QRQGRLSFYA TAIGEEAINI ASAAALTPQD VIFPQYREPG VLLWRGFTLQ
201: EFANQCFGNK SDYGKGRQMP VHYGSNKLNY FTVSATIATQ LPNAVGAAYS LKMDKKDACA VTYFGDGGTS EGDFHAALNI AAVMEAPVLF ICRNNGWAIS
301: TPTSDQFRSD GVVVKGRAYG IRSIRVDGND ALAMYSAVHT AREMAIREQR PILIEALTYR VGHHSTSDDS TRYRSAGEIE WWNKARNPLS RFRTWIESNG
401: WWSDKTESDL RSRIKKEMLE ALRVAEKTEK PNLQNMFSDV YDVPPSNLRE QELLVRQTIN SHPQDYPSDV PL

Arabidopsis Description

2-oxoisovalerate dehydrogenase subunit alpha 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q84JL2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.