Factsheet for HORVU2Hr1G001600.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
TargetP:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU5Hr1G077200.2
HORVU7Hr1G055090.3

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G01090.1	HORVU5Hr1G077200.2	AT5G50850.1	21798944
AT1G01090.1	HORVU7Hr1G055090.3	AT5G50850.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G086290.1	Barley	extracellular, vacuole	22.54	100.0
TraesCS2B01G012500.1	Wheat	plastid	85.12	92.4
TraesCS2A01G010100.1	Wheat	plastid	85.12	92.4
TraesCS2D01G010700.1	Wheat	golgi	84.46	91.9
Os04t0119400-01	Rice	plastid	81.4	87.53
CDY37428	Canola	cytosol	27.79	86.39
Zm00001d004473_P001	Maize	plastid	78.99	84.35
CDY37427	Canola	cytosol, mitochondrion, plastid	28.23	83.77
EES10385	Sorghum	plastid	78.34	83.06
GSMUA_Achr11P...	Banana	plastid	71.77	76.28
VIT_15s0048g02580.t01	Wine grape	plastid	70.9	74.83
CDY37473	Canola	plastid	68.93	74.47
KRH68960	Soybean	plastid	67.83	74.16
Bra032619.1-P	Field mustard	plastid	68.93	74.12
CDY32445	Canola	plastid	68.93	74.12
Bra033286.1-P	Field mustard	plastid	68.93	73.94
CDX90009	Canola	plastid	68.93	73.94
CDY15202	Canola	plastid	69.37	73.89
AT1G01090.1	Thale cress	plastid	68.93	73.6
KRG97240	Soybean	plastid	68.05	72.83
KRH06359	Soybean	nucleus	68.49	72.45
KRH47800	Soybean	plastid	68.27	72.22
PGSC0003DMT400035288	Potato	plastid	68.27	71.4
Solyc12g009400.1.1	Tomato	plastid	68.49	71.14
Solyc12g009410.1.1	Tomato	plastid	68.49	71.14
PGSC0003DMT400007571	Potato	plastid	68.27	70.91
Solyc07g042920.1.1	Tomato	cytosol, mitochondrion, plastid	42.23	67.72
HORVU6Hr1G076810.1	Barley	plastid	31.73	35.89
GSMUA_Achr5P18750_001	Banana	plastid	67.83	34.37
HORVU7Hr1G040460.4	Barley	mitochondrion	31.07	28.23
HORVU5Hr1G034820.3	Barley	mitochondrion	20.35	19.83

Protein Annotations

KEGG:00010+1.2.4.1	KEGG:00020+1.2.4.1	KEGG:00620+1.2.4.1	Gene3D:3.40.50.970	MapMan:5.1.2.2.1.1	UniProt:A0A287GW71
ncoils:Coil	InterPro:DH_E1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004739	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0006086	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016491	GO:GO:0016624	GO:GO:0043231	GO:GO:0055114	EnsemblPlantsGene:HORVU2Hr1G001600
EnsemblPlants:HORVU2Hr1G001600.1	PFAM:PF00676	PANTHER:PTHR11516	PANTHER:PTHR11516:SF25	InterPro:Pyrv_DH_E1_asu_subgrp-y	SUPFAM:SSF52518
InterPro:THDP-binding	TIGRFAMs:TIGR03182	UniParc:UPI000B488808	SEG:seg	:	:

Description

Pyruvate dehydrogenase E1 component subunit alpha [Source:UniProtKB/TrEMBL;Acc:A0A287GW71]

Coordinates

chrchr2H:-:3328266..3331632

Molecular Weight (calculated)

47523.0 Da

IEP (calculated)

6.942

GRAVY (calculated)

-0.242

Length

457 amino acids

Sequence
(BLAST)

001: GPSQALSLSL NPSSFLVLSA PPLPSLYPPP PRPLLPHPAA LRPPXXXXXX XXXXXXXXXX XXXXXXXXVY KRQLHRRPAR RLGSVLAVSS DVLKAAPAAA
101: AYPAVTREEA LELYEDMILG RNFEDMCAQM YYRGKMFGFV HLYNGQEAVS TGFIKQLNQP DCVVSTYRDH VHALSKGVPA REVMAELFGK ATGCCRGQGG
201: SMHMFSEPHN LLGGFAFIGE GIPVATGAAF AAKYRHEVLK QSSPGGLDVT LAFFGDGTCN NGQFFECLNM AQLWKLPIIF VVENNLWAIG MSHLRSTSDP
301: EIWKKGPAFG MPGVHVDGMD VLKVREVAKE AIDRARRGEG PTLVECETYR FRGHSLADPD ELRRPDEKSH YAARDPITSL KKYIIEQNLA SEAELKSIEK
401: KIDDVVEEAV EFADASPLPP RSQLLENVFA DPKGFGIGPD GKYRCEDPKF TQGTAQV

Best Arabidopsis Sequence Match ( AT1G01090.1 )
(BLAST)

001: MATAFAPTKL TATVPLHGSH ENRLLLPIRL APPSSFLGST RSLSLRRLNH SNATRRSPVV SVQEVVKEKQ STNNTSLLIT KEEGLELYED MILGRSFEDM
101: CAQMYYRGKM FGFVHLYNGQ EAVSTGFIKL LTKSDSVVST YRDHVHALSK GVSARAVMSE LFGKVTGCCR GQGGSMHMFS KEHNMLGGFA FIGEGIPVAT
201: GAAFSSKYRR EVLKQDCDDV TVAFFGDGTC NNGQFFECLN MAALYKLPII FVVENNLWAI GMSHLRATSD PEIWKKGPAF GMPGVHVDGM DVLKVREVAK
301: EAVTRARRGE GPTLVECETY RFRGHSLADP DELRDAAEKA KYAARDPIAA LKKYLIENKL AKEAELKSIE KKIDELVEEA VEFADASPQP GRSQLLENVF
401: ADPKGFGIGP DGRYRCEDPK FTEGTAQV

Arabidopsis Description

PDH-E1 ALPHAPyruvate dehydrogenase E1 component subunit alpha [Source:UniProtKB/TrEMBL;Acc:A0A178W8A7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.