Subcellular Localization
min:
: max
Winner_takes_all: extracellular, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 2
- vacuole 3
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU5Hr1G077200.2 | |
| HORVU7Hr1G055090.3 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G01090.1 | HORVU5Hr1G077200.2 | AT5G50850.1 | 21798944 |
| AT1G01090.1 | HORVU7Hr1G055090.3 | AT5G50850.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY37428 | Canola | cytosol | 50.49 | 35.37 |
| TraesCS2D01G010700.1 | Wheat | golgi | 100.0 | 24.52 |
| TraesCS2B01G012500.1 | Wheat | plastid | 100.0 | 24.47 |
| TraesCS2A01G010100.1 | Wheat | plastid | 100.0 | 24.47 |
| Os04t0119400-01 | Rice | plastid | 96.12 | 23.29 |
| KRH68960 | Soybean | plastid | 93.2 | 22.97 |
| Zm00001d004473_P001 | Maize | plastid | 95.15 | 22.9 |
| EES10385 | Sorghum | plastid | 95.15 | 22.74 |
| HORVU2Hr1G001600.1 | Barley | plastid | 100.0 | 22.54 |
| KRG97240 | Soybean | plastid | 93.2 | 22.48 |
| CDY37473 | Canola | plastid | 92.23 | 22.46 |
| Bra032619.1-P | Field mustard | plastid | 92.23 | 22.35 |
| CDY32445 | Canola | plastid | 92.23 | 22.35 |
| Bra033286.1-P | Field mustard | plastid | 92.23 | 22.3 |
| CDX90009 | Canola | plastid | 92.23 | 22.3 |
| AT1G01090.1 | Thale cress | plastid | 92.23 | 22.2 |
| VIT_15s0048g02580.t01 | Wine grape | plastid | 93.2 | 22.17 |
| CDY15202 | Canola | plastid | 92.23 | 22.14 |
| GSMUA_Achr11P... | Banana | plastid | 92.23 | 22.09 |
| PGSC0003DMT400007571 | Potato | plastid | 94.17 | 22.05 |
| Solyc12g009410.1.1 | Tomato | plastid | 94.17 | 22.05 |
| Solyc12g009400.1.1 | Tomato | plastid | 94.17 | 22.05 |
| PGSC0003DMT400035288 | Potato | plastid | 93.2 | 21.97 |
| KRH47800 | Soybean | plastid | 90.29 | 21.53 |
| KRH06359 | Soybean | nucleus | 90.29 | 21.53 |
| Solyc07g042920.1.1 | Tomato | cytosol, mitochondrion, plastid | 45.63 | 16.49 |
| HORVU6Hr1G076810.1 | Barley | plastid | 44.66 | 11.39 |
| GSMUA_Achr5P18750_001 | Banana | plastid | 92.23 | 10.53 |
| HORVU7Hr1G040460.4 | Barley | mitochondrion | 43.69 | 8.95 |
| HORVU5Hr1G034820.3 | Barley | mitochondrion | 32.04 | 7.04 |
| CDY37427 | Canola | cytosol, mitochondrion, plastid | 7.77 | 5.19 |
Protein Annotations
| EnsemblPlants:HORVU2Hr1G086290.1 | EnsemblPlantsGene:HORVU2Hr1G086290 | Gene3D:3.40.50.970 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016624 | GO:GO:0055114 | InterPro:DH_E1 | InterPro:THDP-binding | PANTHER:PTHR11516 |
| PANTHER:PTHR11516:SF25 | PFAM:PF00676 | SUPFAM:SSF52518 | UniParc:UPI000B488EFA | UniProt:A0A287ISB2 | MapMan:35.1 |
Description
No Description!
Coordinates
chrchr2H:+:622398929..622399239
Molecular Weight (calculated)
11689.2 Da
IEP (calculated)
7.515
GRAVY (calculated)
-0.363
Length
103 amino acids
Sequence
(BLAST)
(BLAST)
001: FECLNMAQLW KLPIIFVVEN NLWAIGMSHL RSTSDPEIWK KGPAFGMPGV HVDGMDVLKV REVAKEAIDR ARRGEGPTLV ECETYRFRGH SLADPDELRR
101: PGK
101: PGK
001: MATAFAPTKL TATVPLHGSH ENRLLLPIRL APPSSFLGST RSLSLRRLNH SNATRRSPVV SVQEVVKEKQ STNNTSLLIT KEEGLELYED MILGRSFEDM
101: CAQMYYRGKM FGFVHLYNGQ EAVSTGFIKL LTKSDSVVST YRDHVHALSK GVSARAVMSE LFGKVTGCCR GQGGSMHMFS KEHNMLGGFA FIGEGIPVAT
201: GAAFSSKYRR EVLKQDCDDV TVAFFGDGTC NNGQFFECLN MAALYKLPII FVVENNLWAI GMSHLRATSD PEIWKKGPAF GMPGVHVDGM DVLKVREVAK
301: EAVTRARRGE GPTLVECETY RFRGHSLADP DELRDAAEKA KYAARDPIAA LKKYLIENKL AKEAELKSIE KKIDELVEEA VEFADASPQP GRSQLLENVF
401: ADPKGFGIGP DGRYRCEDPK FTEGTAQV
101: CAQMYYRGKM FGFVHLYNGQ EAVSTGFIKL LTKSDSVVST YRDHVHALSK GVSARAVMSE LFGKVTGCCR GQGGSMHMFS KEHNMLGGFA FIGEGIPVAT
201: GAAFSSKYRR EVLKQDCDDV TVAFFGDGTC NNGQFFECLN MAALYKLPII FVVENNLWAI GMSHLRATSD PEIWKKGPAF GMPGVHVDGM DVLKVREVAK
301: EAVTRARRGE GPTLVECETY RFRGHSLADP DELRDAAEKA KYAARDPIAA LKKYLIENKL AKEAELKSIE KKIDELVEEA VEFADASPQP GRSQLLENVF
401: ADPKGFGIGP DGRYRCEDPK FTEGTAQV
Arabidopsis Description
PDH-E1 ALPHAPyruvate dehydrogenase E1 component subunit alpha [Source:UniProtKB/TrEMBL;Acc:A0A178W8A7]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.