Factsheet for HORVU5Hr1G077200.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	mitochondrion
TargetP:	plastid
YLoc:	mitochondrion

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU6Hr1G076810.1
HORVU7Hr1G040460.4

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G50850.1	HORVU6Hr1G076810.1	AT1G59900.1	21798944
AT5G50850.1	HORVU7Hr1G040460.4	AT1G59900.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G291500.1	Wheat	golgi	83.53	95.74
TraesCS5B01G290600.1	Wheat	mitochondrion	83.06	95.21
TraesCS5D01G299000.1	Wheat	mitochondrion	83.06	95.21
Zm00001d006107_P001	Maize	mitochondrion	77.49	89.3
EER97019	Sorghum	mitochondrion	77.26	88.8
HORVU7Hr1G055090.3	Barley	mitochondrion	75.64	88.11
Os09t0509200-01	Rice	mitochondrion	76.57	87.77
KRH16935	Soybean	mitochondrion	71.46	85.56
KRH73802	Soybean	mitochondrion	71.23	85.28
KRH14338	Soybean	mitochondrion	70.53	84.44
Solyc03g097680.2.1	Tomato	plastid	71.93	84.01
PGSC0003DMT400011072	Potato	mitochondrion	71.69	83.74
Solyc06g072580.2.1	Tomato	nucleus	70.77	83.11
AT5G50850.1	Thale cress	mitochondrion	69.84	82.92
VIT_01s0146g00310.t01	Wine grape	mitochondrion	70.53	82.83
CDX71636	Canola	mitochondrion	69.37	82.14
CDX84881	Canola	mitochondrion	69.84	82.02
CDY16348	Canola	mitochondrion	69.61	81.97
VIT_17s0000g00690.t01	Wine grape	mitochondrion	67.98	81.84
CDX91560	Canola	mitochondrion	69.37	81.69
CDY05827	Canola	mitochondrion	68.91	81.59
CDY45814	Canola	mitochondrion	69.37	81.47
Bra026451.1-P	Field mustard	mitochondrion	65.2	81.45
Bra022529.1-P	Field mustard	mitochondrion	68.91	81.15
Bra022757.1-P	Field mustard	mitochondrion	68.91	80.93
PGSC0003DMT400069263	Potato	mitochondrion	70.3	78.91
Zm00001d021070_P002	Maize	mitochondrion	74.01	77.62
GSMUA_Achr5P25000_001	Banana	mitochondrion, plastid	74.01	77.05
GSMUA_Achr8P09180_001	Banana	extracellular, mitochondrion, peroxisome	38.75	76.96
Bra035715.1-P	Field mustard	mitochondrion	67.29	64.02
HORVU6Hr1G017000.1	Barley	cytosol, mitochondrion	11.83	40.48
HORVU0Hr1G009910.2	Barley	plastid	33.18	36.29
HORVU5Hr1G114960.1	Barley	cytosol	16.71	35.12
HORVU3Hr1G031230.1	Barley	mitochondrion, peroxisome, plastid	12.53	34.39
HORVU5Hr1G092920.4	Barley	plastid	35.96	33.33
HORVU6Hr1G006560.2	Barley	mitochondrion	28.54	33.06
HORVU1Hr1G025150.1	Barley	mitochondrion, nucleus, peroxisome	10.44	28.66
HORVU6Hr1G037690.1	Barley	plastid	10.21	26.19

Protein Annotations

KEGG:00010+1.2.4.1	KEGG:00020+1.2.4.1	KEGG:00620+1.2.4.1	MapMan:2.2.1.1.2	Gene3D:3.40.50.920	Gene3D:3.40.50.970
UniProt:A0A287RVV2	GO:GO:0003674	GO:GO:0003824	GO:GO:0004739	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005759	GO:GO:0005975	GO:GO:0006086
GO:GO:0006091	GO:GO:0006096	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0009058	GO:GO:0009987	GO:GO:0016491	GO:GO:0055114	EnsemblPlantsGene:HORVU5Hr1G077200	EnsemblPlants:HORVU5Hr1G077200.2
InterPro:IPR009014	InterPro:PDHB	PFAM:PF02779	PFAM:PF02780	PANTHER:PTHR11624	PANTHER:PTHR11624:SF94
SMART:SM00861	SUPFAM:SSF52518	SUPFAM:SSF52922	InterPro:THDP-binding	InterPro:Transketo_C/PFOR_II	InterPro:Transketolase-like_Pyr-bd
InterPro:Transketolase_C	UniParc:UPI000B481EA0	SEG:seg	:	:	:

Description

Pyruvate dehydrogenase E1 component subunit beta [Source:UniProtKB/TrEMBL;Acc:A0A287RVV2]

Coordinates

chrchr5H:-:552970957..552978011

Molecular Weight (calculated)

45889.1 Da

IEP (calculated)

6.272

GRAVY (calculated)

-0.017

Length

431 amino acids

Sequence
(BLAST)

001: PLHLLRPPIP PFRGGVCVSS PTPRPSRCLQ PGDTSAAAPP SNSPPLPAAT IAGTKMLGAA RRQLGSGHML AQVLRRLRPT AAASTEAARG YSSAAKEITV
101: RDALNSALDE EMSADPSVFL MGEEVGEYQG AYKITKGLLD KYGPDRVLDT PITEAGFTGI GVGAAYQGLR PVIEFMTFNF SMQAIDHIIN SAAKSNYMSA
201: GQINVPIVFR GPNGAAAGVG AQHSQCYAAW FAHVPGLKVL APYSSEDARG LLKAAIRDPD PVVFLENELL YGESFPVSDE VLDSSFALPI GKAKIEREGK
301: DVTITAFSKM VGYALQAAEI LSKEGISAEV INLRSIRPLD RAAINASVRK TNRLVTLEEG FPQHGVGAEI CMSVVEESFE YLDAPIERIA GADVPMPYAA
401: NLERLAVPQI EDIVRAARRA CYRALPMAAT A

Best Arabidopsis Sequence Match ( AT5G50850.1 )
(BLAST)

001: MLGILRQRAI DGASTLRRTR FALVSARSYA AGAKEMTVRD ALNSAIDEEM SADPKVFVMG EEVGQYQGAY KITKGLLEKY GPERVYDTPI TEAGFTGIGV
101: GAAYAGLKPV VEFMTFNFSM QAIDHIINSA AKSNYMSAGQ INVPIVFRGP NGAAAGVGAQ HSQCYAAWYA SVPGLKVLAP YSAEDARGLL KAAIRDPDPV
201: VFLENELLYG ESFPISEEAL DSSFCLPIGK AKIEREGKDV TIVTFSKMVG FALKAAEKLA EEGISAEVIN LRSIRPLDRA TINASVRKTS RLVTVEEGFP
301: QHGVCAEICA SVVEESFSYL DAPVERIAGA DVPMPYAANL ERLALPQIED IVRASKRACY RSK

Arabidopsis Description

PDH2Pyruvate dehydrogenase E1 component subunit beta [Source:UniProtKB/TrEMBL;Acc:A0A178UM82]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.