Factsheet for HORVU5Hr1G114960.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

peroxisome 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome
MultiLoc:	peroxisome
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G031230.1	Barley	mitochondrion, peroxisome, plastid	67.32	87.9
HORVU1Hr1G025150.1	Barley	mitochondrion, nucleus, peroxisome	63.9	83.44
HORVU6Hr1G017000.1	Barley	cytosol, mitochondrion	48.29	78.57
TraesCS6B01G050600.1	Wheat	mitochondrion	72.2	52.86
TraesCS6A01G036000.1	Wheat	mitochondrion	76.1	42.16
TraesCS6D01G041600.1	Wheat	mitochondrion	76.59	42.09
HORVU6Hr1G006560.2	Barley	mitochondrion	76.1	41.94
Zm00001d007892_P001	Maize	mitochondrion	72.68	41.05
Os07t0170100-01	Rice	mitochondrion	73.66	40.81
EER98039	Sorghum	mitochondrion	73.17	40.65
AT1G55510.1	Thale cress	mitochondrion	68.29	39.77
KRH65916	Soybean	mitochondrion	68.78	39.39
VIT_06s0004g00190.t01	Wine grape	mitochondrion	68.29	39.11
KRH75712	Soybean	mitochondrion	67.8	39.04
CDY10556	Canola	mitochondrion	68.78	38.95
AT3G13450.1	Thale cress	mitochondrion	67.8	38.83
Solyc01g028900.2.1	Tomato	plastid	65.85	37.71
GSMUA_Achr8P20340_001	Banana	mitochondrion	68.78	37.6
Bra030856.1-P	Field mustard	mitochondrion	68.78	37.2
CDY02436	Canola	mitochondrion	68.78	35.97
HORVU6Hr1G037690.1	Barley	plastid	18.05	22.02
HORVU7Hr1G055090.3	Barley	mitochondrion	34.15	18.92
HORVU5Hr1G077200.2	Barley	mitochondrion, plastid	35.12	16.71
HORVU0Hr1G009910.2	Barley	plastid	28.78	14.97
HORVU5Hr1G092920.4	Barley	plastid	29.27	12.9

Protein Annotations

EnsemblPlants:HORVU5Hr1G114960.1	EnsemblPlantsGene:HORVU5Hr1G114960	Gene3D:3.40.50.920	Gene3D:3.40.50.970	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	InterPro:IPR009014	InterPro:THDP-binding	InterPro:Transketo_C/PFOR_II	InterPro:Transketolase-like_Pyr-bd
PANTHER:PTHR42980	PANTHER:PTHR42980:SF1	PFAM:PF02779	SMART:SM00861	SUPFAM:SSF52518	SUPFAM:SSF52922
UniParc:UPI000B461903	UniProt:A0A287SU13	MapMan:4.2.7.2.1.2	:	:	:

Description

No Description!

Coordinates

chrchr5H:-:645198483..645201493

Molecular Weight (calculated)

22868.3 Da

IEP (calculated)

8.981

GRAVY (calculated)

-0.347

Length

205 amino acids

Sequence
(BLAST)

001: MDNRAIAEIQ FADYIFPAFD QIVNEAAKFR YRSGNEFNCG GLTIRSPYGA VGHGGHYHSQ SPEAFFCHVP GLKVVIPRSP REAKGLLLAS IRDPNPVIFF
101: EPKWLYRLSV EEVPEGDYML PLSQAEVIRK GSDITLVGWG AQLAVLEQAC EDASKRCRRM SCTRVRFPES TTTGRSVGDR FTDSAVTVTK GTPQGRRRKL
201: DTRAI

Best Arabidopsis Sequence Match ( AT1G55510.1 )
(BLAST)

001: MAALLGRSCR KLSFPSLSHG ARRVSTETGK PLNLYSAINQ ALHIALDTDP RSYVFGEDVG FGGVFRCTTG LAERFGKNRV FNTPLCEQGI VGFGIGLAAM
101: GNRAIVEIQF ADYIYPAFDQ IVNEAAKFRY RSGNQFNCGG LTIRAPYGAV GHGGHYHSQS PEAFFCHVPG IKVVIPRSPR EAKGLLLSCI RDPNPVVFFE
201: PKWLYRQAVE EVPEHDYMIP LSEAEVIREG NDITLVGWGA QLTVMEQACL DAEKEGISCE LIDLKTLLPW DKETVEASVK KTGRLLISHE APVTGGFGAE
301: ISATILERCF LKLEAPVSRV CGLDTPFPLV FEPFYMPTKN KILDAIKSTV NY

Arabidopsis Description

BCDH BETA12-oxoisovalerate dehydrogenase subunit beta 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SAV3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.