CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 8

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH75712	Soybean	mitochondrion	87.15	87.64
HORVU6Hr1G017000.1	Barley	cytosol, mitochondrion	29.89	84.92
VIT_06s0004g00190.t01	Wine grape	mitochondrion	84.08	84.08
AT1G55510.1	Thale cress	mitochondrion	82.4	83.81
AT3G13450.1	Thale cress	mitochondrion	82.12	82.12
Solyc01g028900.2.1	Tomato	plastid	81.56	81.56
CDY10556	Canola	mitochondrion	78.77	77.9
Zm00001d007892_P001	Maize	mitochondrion	77.93	76.86
TraesCS6A01G036000.1	Wheat	mitochondrion	78.77	76.22
EER98039	Sorghum	mitochondrion	78.49	76.15
GSMUA_Achr8P20340_001	Banana	mitochondrion	79.61	76.0
TraesCS6D01G041600.1	Wheat	mitochondrion	79.05	75.87
Os07t0170100-01	Rice	mitochondrion	77.93	75.41
HORVU6Hr1G006560.2	Barley	mitochondrion	77.93	75.0
CDY02436	Canola	mitochondrion	78.49	71.68
TraesCS6B01G050600.1	Wheat	mitochondrion	55.31	70.71
HORVU5Hr1G114960.1	Barley	cytosol	39.39	68.78
Bra030856.1-P	Field mustard	mitochondrion	70.95	67.02
HORVU6Hr1G037690.1	Barley	plastid	26.54	56.55
HORVU3Hr1G031230.1	Barley	mitochondrion, peroxisome, plastid	24.3	55.41
HORVU1Hr1G025150.1	Barley	mitochondrion, nucleus, peroxisome	21.79	49.68
KRH16935	Soybean	mitochondrion	30.17	30.0
KRH14338	Soybean	mitochondrion	30.17	30.0
KRH73802	Soybean	mitochondrion	29.89	29.72
KRH58644	Soybean	nucleus	32.12	28.4
KRH42550	Soybean	plastid	32.12	28.33
KRH15497	Soybean	plastid	31.84	28.15
KRH05520	Soybean	plastid	31.28	27.79

Protein Annotations

EntrezGene:100780597	Gene3D:3.40.50.920	Gene3D:3.40.50.970	MapMan:4.2.7.2.1.2	EMBL:ACUP02001781	EnsemblPlantsGene:GLYMA_03G070200
GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	UniProt:I1JM18	InterPro:IPR009014
EnsemblPlants:KRH65916	ProteinID:KRH65916	ProteinID:KRH65916.1	PFAM:PF02779	PFAM:PF02780	PANTHER:PTHR42980
PANTHER:PTHR42980:SF1	SMART:SM00861	SUPFAM:SSF52518	SUPFAM:SSF52922	InterPro:THDP-binding	InterPro:Transketo_C/PFOR_II
InterPro:Transketolase-like_Pyr-bd	InterPro:Transketolase_C	UniParc:UPI0002336C63	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr3:-:16215981..16222596

Molecular Weight (calculated)

39032.0 Da

IEP (calculated)

6.506

GRAVY (calculated)

0.008

Length

358 amino acids

Sequence
(BLAST)

001: MSTKFGRLVP LVFSKRGFST STSVQKGGGG SEEGLKSLNL CSAINQALHI ALDSDPRSYV FGEDVSFGGV FRCTTGLADQ FGKKRVFNTP LCEQGIVGFG
101: IGLAAMGNRA IAEIQFADYI FPAFDQIVNE AAKFRYRSGN QFNCGGLTVR APYGAVGHGG HYHSQSPEAF FCHVPGIKVV IPRSPRQAKG LLLSCIRDPN
201: PVVFFEPKWL YRLAVEEVPE DDYMLPLSEA EVIRQGSDVT LVGWGAQLAI MEQACLDAEK EGISCELIDL KTLIPWDKET VESSVNKTGR LLVSHEAPIT
301: GGFGAEISAS IVERCFSRLE APVARICGLD TPFPLVFEPF YMPTKNKILD AIKSTVKY

Best Arabidopsis Sequence Match ( AT1G55510.1 )
(BLAST)

001: MAALLGRSCR KLSFPSLSHG ARRVSTETGK PLNLYSAINQ ALHIALDTDP RSYVFGEDVG FGGVFRCTTG LAERFGKNRV FNTPLCEQGI VGFGIGLAAM
101: GNRAIVEIQF ADYIYPAFDQ IVNEAAKFRY RSGNQFNCGG LTIRAPYGAV GHGGHYHSQS PEAFFCHVPG IKVVIPRSPR EAKGLLLSCI RDPNPVVFFE
201: PKWLYRQAVE EVPEHDYMIP LSEAEVIREG NDITLVGWGA QLTVMEQACL DAEKEGISCE LIDLKTLLPW DKETVEASVK KTGRLLISHE APVTGGFGAE
301: ISATILERCF LKLEAPVSRV CGLDTPFPLV FEPFYMPTKN KILDAIKSTV NY

Arabidopsis Description

BCDH BETA12-oxoisovalerate dehydrogenase subunit beta 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SAV3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.