Factsheet for HORVU7Hr1G055090.3

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU6Hr1G076810.1
HORVU7Hr1G040460.4

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G50850.1	HORVU6Hr1G076810.1	AT1G59900.1	21798944
AT5G50850.1	HORVU7Hr1G040460.4	AT1G59900.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G161100.1	Wheat	mitochondrion	99.46	99.73
TraesCS7A01G263300.1	Wheat	plastid	99.19	99.46
TraesCS7D01G263900.2	Wheat	mitochondrion	97.84	98.91
Os08t0536000-01	Rice	mitochondrion	92.97	91.98
KXG25507	Sorghum	mitochondrion	89.19	88.24
KRH16935	Soybean	mitochondrion	83.78	86.11
KRH73802	Soybean	mitochondrion	83.24	85.56
KRH14338	Soybean	mitochondrion	82.43	84.72
VIT_01s0146g00310.t01	Wine grape	mitochondrion	83.24	83.92
CDY45814	Canola	mitochondrion	82.97	83.65
CDX84881	Canola	mitochondrion	82.97	83.65
Bra026451.1-P	Field mustard	mitochondrion	77.84	83.48
AT5G50850.1	Thale cress	mitochondrion	81.89	83.47
CDY16348	Canola	mitochondrion	82.43	83.33
CDX91560	Canola	mitochondrion	82.43	83.33
CDX71636	Canola	mitochondrion	81.62	82.97
Solyc06g072580.2.1	Tomato	nucleus	82.16	82.83
Bra022757.1-P	Field mustard	mitochondrion	82.16	82.83
CDY05827	Canola	mitochondrion	81.35	82.69
PGSC0003DMT400011072	Potato	mitochondrion	82.43	82.66
Zm00001d031659_P001	Maize	mitochondrion	88.65	82.62
Bra022529.1-P	Field mustard	mitochondrion	81.35	82.24
VIT_17s0000g00690.t01	Wine grape	mitochondrion	79.19	81.84
Solyc03g097680.2.1	Tomato	plastid	81.62	81.84
GSMUA_Achr8P09180_001	Banana	extracellular, mitochondrion, peroxisome	46.22	78.8
PGSC0003DMT400069263	Potato	mitochondrion	81.62	78.65
GSMUA_Achr5P25000_001	Banana	mitochondrion, plastid	85.95	76.81
HORVU5Hr1G077200.2	Barley	mitochondrion, plastid	88.11	75.64
Bra035715.1-P	Field mustard	mitochondrion	79.46	64.9
HORVU6Hr1G017000.1	Barley	cytosol, mitochondrion	13.78	40.48
HORVU0Hr1G009910.2	Barley	plastid	36.49	34.26
HORVU5Hr1G114960.1	Barley	cytosol	18.92	34.15
HORVU3Hr1G031230.1	Barley	mitochondrion, peroxisome, plastid	14.32	33.76
HORVU6Hr1G006560.2	Barley	mitochondrion	31.35	31.18
HORVU5Hr1G092920.4	Barley	plastid	37.57	29.89
HORVU1Hr1G025150.1	Barley	mitochondrion, nucleus, peroxisome	12.16	28.66
HORVU6Hr1G037690.1	Barley	plastid	10.54	23.21

Protein Annotations

KEGG:00010+1.2.4.1	KEGG:00020+1.2.4.1	KEGG:00620+1.2.4.1	MapMan:2.2.1.1.2	Gene3D:3.40.50.920	Gene3D:3.40.50.970
UniProt:A0A287WK58	GO:GO:0003674	GO:GO:0003824	GO:GO:0004739	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005759	GO:GO:0005975	GO:GO:0006086
GO:GO:0006091	GO:GO:0006096	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0009058	GO:GO:0009987	GO:GO:0016491	GO:GO:0055114	EnsemblPlantsGene:HORVU7Hr1G055090	EnsemblPlants:HORVU7Hr1G055090.3
InterPro:IPR009014	InterPro:PDHB	PFAM:PF02779	PFAM:PF02780	PANTHER:PTHR11624	PANTHER:PTHR11624:SF94
SMART:SM00861	SUPFAM:SSF52518	SUPFAM:SSF52922	InterPro:THDP-binding	InterPro:Transketo_C/PFOR_II	InterPro:Transketolase-like_Pyr-bd
InterPro:Transketolase_C	UniParc:UPI000B47C5D1	:	:	:	:

Description

Pyruvate dehydrogenase E1 component subunit beta [Source:UniProtKB/TrEMBL;Acc:A0A287WK58]

Coordinates

chrchr7H:+:223540999..223548166

Molecular Weight (calculated)

39637.6 Da

IEP (calculated)

5.138

GRAVY (calculated)

0.019

Length

370 amino acids

Sequence
(BLAST)

001: MLGAARRSGC VLGQLMQTLR PAATAARSYS ATPKEMTVRE ALNSALDEEM SADPSVFLMG EEVGEYQGAY KITKGLLDKY GPDRVLDTPI TEAGFTGIGV
101: GAAYQGLRPV VEFMTFNFSM QAIDHIINSA AKSNYMSAGQ ISVPIVFRGP NGAAAGVGAQ HSQCYAAWYA HVPGLKVLTP YSAEDARGLL KAAIRDPDPV
201: VFLENELLYG ESFPIKAEVL DSSFSVPIGK AKIEREGKDV TITAFSKMVG YALQAAEILS KEGISAEVVI NLRSIRPLDR AAINASVRKT NRLVTVEEGF
301: PQHGVGAEIC MSVVEDSFEY LDAPVERIAG ADVPMPYAAN LERLAVPQVE DIVRAAKRAC YRSSSMAATA

Best Arabidopsis Sequence Match ( AT5G50850.1 )
(BLAST)

001: MLGILRQRAI DGASTLRRTR FALVSARSYA AGAKEMTVRD ALNSAIDEEM SADPKVFVMG EEVGQYQGAY KITKGLLEKY GPERVYDTPI TEAGFTGIGV
101: GAAYAGLKPV VEFMTFNFSM QAIDHIINSA AKSNYMSAGQ INVPIVFRGP NGAAAGVGAQ HSQCYAAWYA SVPGLKVLAP YSAEDARGLL KAAIRDPDPV
201: VFLENELLYG ESFPISEEAL DSSFCLPIGK AKIEREGKDV TIVTFSKMVG FALKAAEKLA EEGISAEVIN LRSIRPLDRA TINASVRKTS RLVTVEEGFP
301: QHGVCAEICA SVVEESFSYL DAPVERIAGA DVPMPYAANL ERLALPQIED IVRASKRACY RSK

Arabidopsis Description

PDH2Pyruvate dehydrogenase E1 component subunit beta [Source:UniProtKB/TrEMBL;Acc:A0A178UM82]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.