CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EER97019
KXG25507

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G01090.1	EER97019	AT5G50850.1	21798944
AT1G01090.1	KXG25507	AT5G50850.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d004473_P001	Maize	plastid	96.29	96.96
HORVU2Hr1G086290.1	Barley	extracellular, vacuole	22.74	95.15
Os04t0119400-01	Rice	plastid	88.63	89.88
TraesCS2A01G010100.1	Wheat	plastid	87.47	89.55
TraesCS2B01G012500.1	Wheat	plastid	87.24	89.31
TraesCS2D01G010700.1	Wheat	golgi	86.77	89.05
CDY37428	Canola	cytosol	29.7	87.07
CDY37427	Canola	cytosol, mitochondrion, plastid	29.7	83.12
GSMUA_Achr11P...	Banana	plastid	78.19	78.37
HORVU2Hr1G001600.1	Barley	plastid	83.06	78.34
KRH68960	Soybean	plastid	74.01	76.32
VIT_15s0048g02580.t01	Wine grape	plastid	75.41	75.06
CDY37473	Canola	plastid	73.32	74.7
KRG97240	Soybean	plastid	73.78	74.47
Bra032619.1-P	Field mustard	plastid	73.09	74.12
CDY32445	Canola	plastid	73.09	74.12
KRH47800	Soybean	plastid	74.25	74.07
Bra033286.1-P	Field mustard	plastid	73.09	73.94
CDX90009	Canola	plastid	73.09	73.94
KRH06359	Soybean	nucleus	73.78	73.61
AT1G01090.1	Thale cress	plastid	73.09	73.6
CDY15202	Canola	plastid	73.09	73.43
PGSC0003DMT400035288	Potato	plastid	74.01	73.0
Solyc12g009410.1.1	Tomato	plastid	72.85	71.36
PGSC0003DMT400007571	Potato	plastid	72.62	71.14
Solyc12g009400.1.1	Tomato	plastid	72.62	71.14
Solyc07g042920.1.1	Tomato	cytosol, mitochondrion, plastid	45.48	68.77
EES05555	Sorghum	mitochondrion	33.41	36.92
EER88157	Sorghum	mitochondrion	33.64	36.71
GSMUA_Achr5P18750_001	Banana	plastid	71.46	34.15
KXG23145	Sorghum	mitochondrion	23.2	19.76

Protein Annotations

KEGG:00010+1.2.4.1	KEGG:00020+1.2.4.1	KEGG:00620+1.2.4.1	Gene3D:3.40.50.970	MapMan:5.1.2.2.1.1	EntrezGene:8065978
UniProt:C5YBS3	ncoils:Coil	InterPro:DH_E1	EnsemblPlants:EES10385	ProteinID:EES10385	ProteinID:EES10385.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0004739	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006086	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009507
GO:GO:0009536	GO:GO:0009570	GO:GO:0009941	GO:GO:0009987	GO:GO:0016491	GO:GO:0016624
GO:GO:0043231	GO:GO:0055114	PFAM:PF00676	PANTHER:PTHR11516	PANTHER:PTHR11516:SF25	InterPro:Pyrv_DH_E1_asu_subgrp-y
EnsemblPlantsGene:SORBI_3006G011200	SUPFAM:SSF52518	unigene:Sbi.5875	InterPro:THDP-binding	TIGRFAMs:TIGR03182	UniParc:UPI0001A86C60
RefSeq:XP_002446057.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:+:1601933..1606062

Molecular Weight (calculated)

46793.8 Da

IEP (calculated)

6.790

GRAVY (calculated)

-0.231

Length

431 amino acids

Sequence
(BLAST)

001: MAAASFTAAK FLVPVAARSG GERAPPLPPV GASSSSFART LRRGGGAHHH PRLRTALAVS SDLVAGNKAA QAAATHPAVT REEALEVYED MVLGRVFEDM
101: CAQMYYRGKM FGFVHLYNGQ EAVSTGFIKL LNQADCVVST YRDHVHALSK GVPPRNVMAE LFGKATGCCR GQGGSMHMFS APHNLLGGFA FIGEGIPVAT
201: GAAFAAKYRH EVLKESGPDG LDVTLAFFGD GTCNNGQFFE CLNMAQLWKL PIVFVVENNL WAIGMSHLRA TSDPEIWKKG PSFGMPGVHV DGMDVLKVRE
301: VAKEAIERAR RGEGPTLVEC ETYRFRGHSL ADPDELRKPD EKTHYAARDP ITALKKYIIE ENLATESELK SIEKKIDDVV EEAVEFADAS PHPPRSQLLE
401: NVFADPKGFG IGPDGKYRCE DPKFTQGTAQ V

Best Arabidopsis Sequence Match ( AT1G01090.1 )
(BLAST)

001: MATAFAPTKL TATVPLHGSH ENRLLLPIRL APPSSFLGST RSLSLRRLNH SNATRRSPVV SVQEVVKEKQ STNNTSLLIT KEEGLELYED MILGRSFEDM
101: CAQMYYRGKM FGFVHLYNGQ EAVSTGFIKL LTKSDSVVST YRDHVHALSK GVSARAVMSE LFGKVTGCCR GQGGSMHMFS KEHNMLGGFA FIGEGIPVAT
201: GAAFSSKYRR EVLKQDCDDV TVAFFGDGTC NNGQFFECLN MAALYKLPII FVVENNLWAI GMSHLRATSD PEIWKKGPAF GMPGVHVDGM DVLKVREVAK
301: EAVTRARRGE GPTLVECETY RFRGHSLADP DELRDAAEKA KYAARDPIAA LKKYLIENKL AKEAELKSIE KKIDELVEEA VEFADASPQP GRSQLLENVF
401: ADPKGFGIGP DGRYRCEDPK FTEGTAQV

Arabidopsis Description

PDH-E1 ALPHAPyruvate dehydrogenase E1 component subunit alpha [Source:UniProtKB/TrEMBL;Acc:A0A178W8A7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.