Factsheet for GSMUA_Achr3P18980_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 7
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
EpiLoc:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Plant-mPloc:	mitochondrion
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os12t0183100-01	Rice	mitochondrion	75.0	70.99
TraesCS5D01G126700.1	Wheat	mitochondrion	72.17	70.79
TraesCS5B01G121400.3	Wheat	mitochondrion	72.17	70.79
TraesCS5A01G120000.3	Wheat	mitochondrion	72.17	70.79
TraesCS4B01G071500.1	Wheat	mitochondrion	71.3	70.39
Zm00001d023694_P001	Maize	mitochondrion	74.57	70.29
Solyc06g059850.1.1	Tomato	cytosol	57.17	69.21
HORVU5Hr1G034820.3	Barley	mitochondrion	70.43	69.08
KXG23145	Sorghum	mitochondrion	74.78	67.98
VIT_18s0001g14980.t01	Wine grape	plastid	66.3	64.76
VIT_04s0044g01490.t01	Wine grape	mitochondrion	66.52	63.62
CDX81122	Canola	plastid	64.57	63.6
Bra006017.1-P	Field mustard	plastid	64.13	63.03
CDX78354	Canola	plastid	64.57	62.92
AT5G09300.1	Thale cress	plastid	63.91	62.29
KRH64579	Soybean	endoplasmic reticulum	64.35	61.92
KRH64030	Soybean	mitochondrion, plastid	63.7	61.81
KRH53343	Soybean	mitochondrion	65.0	61.4
Solyc05g056480.2.1	Tomato	plastid	61.52	60.6
PGSC0003DMT400060275	Potato	mitochondrion	61.09	60.17
Bra017912.1-P	Field mustard	mitochondrion	61.74	60.17
CDY50237	Canola	mitochondrion	61.74	60.17
CDY65512	Canola	mitochondrion	61.52	59.96
Bra016423.1-P	Field mustard	mitochondrion	60.87	59.45
CDX96593	Canola	mitochondrion	60.43	59.02
KRG99480	Soybean	cytosol	25.87	58.62
Solyc04g063350.2.1	Tomato	mitochondrion	59.78	58.26
CDY65109	Canola	mitochondrion	59.57	57.93
PGSC0003DMT400063962	Potato	mitochondrion, plastid	58.48	57.11
PGSC0003DMT400012840	Potato	cytosol, mitochondrion, plasma membrane	33.7	56.78
KRH53908	Soybean	cytosol	14.78	56.67
PGSC0003DMT400033905	Potato	mitochondrion	55.87	56.36
Solyc12g055880.1.1	Tomato	cytosol	16.52	56.3
AT1G21400.5	Thale cress	plastid	63.04	55.34
Solyc06g059840.2.1	Tomato	mitochondrion	54.78	55.26
Solyc12g055890.1.1	Tomato	mitochondrion	34.57	53.54
AT5G34780.1	Thale cress	cytosol, mitochondrion	34.13	43.01
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	20.0	30.77
GSMUA_Achr7P05520_001	Banana	cytosol, mitochondrion	18.91	29.9
GSMUA_Achr1P18330_001	Banana	cytosol, mitochondrion	20.87	29.63
GSMUA_Achr4P20080_001	Banana	mitochondrion	10.0	26.74
GSMUA_Achr4P20070_001	Banana	cytosol	2.83	26.0
GSMUA_Achr11P...	Banana	plastid	21.09	22.56
GSMUA_Achr5P18750_001	Banana	plastid	22.17	11.31

Protein Annotations

EnsemblPlants:GSMUA_Achr3P18980_001	EnsemblPlants:GSMUA_Achr3T18980_001	EnsemblPlantsGene:GSMUA_Achr3G18980_001	Gene3D:3.40.50.970	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016624	GO:GO:0055114	InterPro:DH_E1	InterPro:THDP-binding
PANTHER:PTHR43380	PANTHER:PTHR43380:SF2	PFAM:PF00676	SUPFAM:SSF52518	UniParc:UPI000296B5BB	UniProt:M0SFW4
MapMan:4.2.7.2.1.1	:	:	:	:	:

Description

2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial [Source:GMGC_GENE;Acc:GSMUA_Achr3G18980_001]

Coordinates

chr3:-:20357081..20361539

Molecular Weight (calculated)

51340.6 Da

IEP (calculated)

6.700

GRAVY (calculated)

-0.359

Length

460 amino acids

Sequence
(BLAST)

001: MRLPTLAWRK MASLAAFGRS LCPTSPLFPA PACGNHGSLL RPVRHLGSGE AAGERVLQVD NRCSDQVLDF PGGKVMFVPE MRFLPGSANE RINCYRVLDD
101: NGQTISGSRF QEVSKEVAIK MYSDMVTLQV MDTIFYEAQR QGRISFYLTS NGEEAINVAS AAALTMDDIV FPQYREPGVL LWRGFTLQEF ANQCFGNMLD
201: YGKGRQMPIH YGSSRLNYFT VSSPIATQIP HAVGAAYSLK TDGKNACTIT YFGDGGTSEG DFHAALNFAA VMESPVIFFC RNNGWAISTP TEEQFRSDGA
301: VVRGQAYGIH SIRVDGNDAL AVYSAVHAAR EMAVHDCRPV LVEALTYRVG HHSTSDDSTK YRSIDEIEHW KTARDPVSRF RKWVEGNGWW SEAAEVEHRS
401: STRKELLRAI QVAERAEKPP LSELFTDVYD QVPANLREQE KSLRETIKKH RNDYPSDVPV

Best Arabidopsis Sequence Match ( AT5G09300.1 )
(BLAST)

001: MALHLRSSFS SKSTLLNILR HNLGFGSRSH VTRHIRQILP HDPPLRGSQN PISRLCNTMA EPETLSSFVQ HEYANNHQVM DFPGGKVAFT PEIQFISESD
101: KERVPCYRVL DDNGQLITNS QFVQVSEEVA VKIYSDMVTL QIMDNIFYEA QRQGRLSFYA TAIGEEAINI ASAAALTPQD VIFPQYREPG VLLWRGFTLQ
201: EFANQCFGNK SDYGKGRQMP VHYGSNKLNY FTVSATIATQ LPNAVGAAYS LKMDKKDACA VTYFGDGGTS EGDFHAALNI AAVMEAPVLF ICRNNGWAIS
301: TPTSDQFRSD GVVVKGRAYG IRSIRVDGND ALAMYSAVHT AREMAIREQR PILIEALTYR VGHHSTSDDS TRYRSAGEIE WWNKARNPLS RFRTWIESNG
401: WWSDKTESDL RSRIKKEMLE ALRVAEKTEK PNLQNMFSDV YDVPPSNLRE QELLVRQTIN SHPQDYPSDV PL

Arabidopsis Description

2-oxoisovalerate dehydrogenase subunit alpha 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q84JL2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.