Factsheet for Bra016423.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 8

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX96593	Canola	mitochondrion	99.15	99.15
Bra017912.1-P	Field mustard	mitochondrion	87.9	87.71
Solyc06g059850.1.1	Tomato	cytosol	55.41	68.68
KRH64579	Soybean	endoplasmic reticulum	65.18	64.23
VIT_18s0001g14980.t01	Wine grape	plastid	63.91	63.91
Bra006017.1-P	Field mustard	plastid	63.48	63.89
KRH53343	Soybean	mitochondrion	65.82	63.66
PGSC0003DMT400063962	Potato	mitochondrion, plastid	61.15	61.15
PGSC0003DMT400033905	Potato	mitochondrion	59.02	60.96
Solyc06g059840.2.1	Tomato	mitochondrion	59.02	60.96
GSMUA_Achr3P18980_001	Banana	mitochondrion	59.45	60.87
Solyc04g063350.2.1	Tomato	mitochondrion	60.3	60.17
TraesCS4B01G071500.1	Wheat	mitochondrion	59.45	60.09
TraesCS5B01G121400.3	Wheat	mitochondrion	59.66	59.91
TraesCS5D01G126700.1	Wheat	mitochondrion	59.45	59.7
Os12t0183100-01	Rice	mitochondrion	61.57	59.67
TraesCS5A01G120000.3	Wheat	mitochondrion	59.24	59.49
HORVU5Hr1G034820.3	Barley	mitochondrion	58.81	59.06
Zm00001d023694_P001	Maize	mitochondrion	60.3	58.2
PGSC0003DMT400012840	Potato	cytosol, mitochondrion, plasma membrane	33.55	57.88
AT5G34780.1	Thale cress	cytosol, mitochondrion	44.59	57.53
KXG23145	Sorghum	mitochondrion	60.08	55.93
Solyc12g055890.1.1	Tomato	mitochondrion	34.82	55.22
Solyc12g055880.1.1	Tomato	cytosol	15.5	54.07
Bra017890.1-P	Field mustard	cytosol	5.31	27.78
Bra035416.1-P	Field mustard	mitochondrion	21.44	25.96
Bra016238.1-P	Field mustard	mitochondrion	21.44	25.25
Bra012418.1-P	Field mustard	mitochondrion	20.59	24.49
Bra024643.1-P	Field mustard	mitochondrion	19.75	24.03
Bra032619.1-P	Field mustard	plastid	19.11	21.18
Bra033286.1-P	Field mustard	plastid	18.9	20.89

Protein Annotations

EnsemblPlants:Bra016423.1	EnsemblPlants:Bra016423.1-P	EnsemblPlantsGene:Bra016423	Gene3D:3.40.50.970	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016624	GO:GO:0055114	InterPro:DH_E1	InterPro:THDP-binding
PANTHER:PTHR43380	PANTHER:PTHR43380:SF2	PFAM:PF00676	SUPFAM:SSF52518	UniParc:UPI0002546975	UniProt:M4DIU6
MapMan:4.2.7.2.1.1	:	:	:	:	:

Description

AT1G21400 (E=1e-245) | 2-oxoisovalerate dehydrogenase, putative / 3-methyl-2-oxobutanoate dehydrogenase, putative / branched-chain alpha-keto acid dehydrogenase E1 alpha subunit, putative

Coordinates

chrA08:-:18395960..18399140

Molecular Weight (calculated)

53218.9 Da

IEP (calculated)

6.522

GRAVY (calculated)

-0.450

Length

471 amino acids

Sequence
(BLAST)

001: MAIWFSRSRN IVFSLRHNLN LSGILIKRDY SPRPAFTNSQ LSSKSVCLDS FTSLRHESTA VEKQLDLVQQ SDEEDPQELN FPGGKVGYTS EMKFIPESSS
101: LRVPCYRVLD EDGRIISNSD YIPVSEKLAV RMYEHMATLQ VMDHIFYEAQ RQGRISFFIT AVGEEAINIA SAAALSPDDV VLPQYREPGV LLWRGFTLQE
201: FANQCFGNKA DRGKGRQMPV HYGSNRHNFF TVSSPIATQL PQAAGVGYSL KMEKKNACAV TFIGDGGTSE GDFHAGLNFA AVMEAPVVFI CRNNGWAIST
301: HISEQFRSDG IVVKGQAYGI RSIRVDGNDA LAVYSAVRSA REMAVKEQRP VLIEAMTYRV GHHSTSDDST KYRAADEIQY WKMSRNPVNR FRKWVEDNGW
401: WSEEDESKIR SNARKQILQA IQAAEKWDKP PLTELFSDVY DVKPKNLEEQ ELGLKELVEK QPQDYPPGFQ I

Best Arabidopsis Sequence Match ( AT1G21400.1 )
(BLAST)

001: MAIWFARSKT LVSSLRHNLN LSTILIKRDY SHRPIFYTTS QLSSTAYLSP FGSLRHESTA VETQADHLVQ QIDEVDAQEL DFPGGKVGYT SEMKFIPESS
101: SRRIPCYRVL DEDGRIIPDS DFIPVSEKLA VRMYEQMATL QVMDHIFYEA QRQGRISFYL TSVGEEAINI ASAAALSPDD VVLPQYREPG VLLWRGFTLE
201: EFANQCFGNK ADYGKGRQMP IHYGSNRLNY FTISSPIATQ LPQAAGVGYS LKMDKKNACT VTFIGDGGTS EGDFHAGLNF AAVMEAPVVF ICRNNGWAIS
301: THISEQFRSD GIVVKGQAYG IRSIRVDGND ALAVYSAVRS AREMAVTEQR PVLIEMMTYR VGHHSTSDDS TKYRAADEIQ YWKMSRNPVN RFRKWVEDNG
401: WWSEEDESKL RSNARKQLLQ AIQAAEKWEK QPLTELFNDV YDVKPKNLEE QELGLKELVK KQPQDYPPGF HV

Arabidopsis Description

Thiamin diphosphate-binding fold (THDP-binding) superfamily protein [Source:TAIR;Acc:AT1G21400]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.