Factsheet for VIT_01s0026g00990.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

mitochondrion 8
plastid 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_09s0018g01940.t01	Wine grape	mitochondrion, plastid	93.22	93.22
GSMUA_Achr7P05520_001	Banana	cytosol, mitochondrion	63.07	86.25
GSMUA_Achr1P18330_001	Banana	cytosol, mitochondrion	69.85	85.8
Zm00001d014833_P001	Maize	cytosol, golgi	19.35	85.56
CDY31596	Canola	mitochondrion	14.32	85.07
CDY70124	Canola	cytosol	29.9	82.07
Bra035416.1-P	Field mustard	mitochondrion	79.4	81.23
CDY24500	Canola	mitochondrion	79.4	81.23
CDY33613	Canola	mitochondrion	79.4	81.23
KRH45768	Soybean	mitochondrion	80.4	81.22
KRH69435	Soybean	mitochondrion	80.65	81.06
KRG99219	Soybean	mitochondrion	69.35	80.23
TraesCS6A01G311800.1	Wheat	golgi	74.62	80.05
PGSC0003DMT400058223	Potato	mitochondrion	78.64	80.05
AT1G59900.1	Thale cress	mitochondrion	78.14	79.95
Solyc05g006520.2.1	Tomato	plastid	78.39	79.8
KRH74712	Soybean	mitochondrion	72.86	79.23
Os02t0739600-01	Rice	mitochondrion	77.14	78.72
PGSC0003DMT400004851	Potato	mitochondrion	76.63	78.61
Solyc04g005080.2.1	Tomato	mitochondrion, unclear	76.88	78.26
CDY38784	Canola	mitochondrion	76.88	78.06
Zm00001d017985_P001	Maize	mitochondrion	76.38	77.95
EES05555	Sorghum	mitochondrion	76.13	77.69
TraesCS6D01G291100.1	Wheat	mitochondrion	75.63	77.58
CDY16236	Canola	mitochondrion	75.38	77.52
AT1G24180.1	Thale cress	mitochondrion	76.38	77.35
TraesCS6B01G342000.1	Wheat	mitochondrion	75.38	77.32
CDY11622	Canola	mitochondrion	76.13	77.3
Bra024643.1-P	Field mustard	mitochondrion	75.13	77.26
Zm00001d052289_P001	Maize	mitochondrion	75.13	76.67
Bra012418.1-P	Field mustard	mitochondrion	75.88	76.26
CDY40292	Canola	mitochondrion	75.63	76.2
CDY28458	Canola	mitochondrion	75.63	76.2
Bra016238.1-P	Field mustard	mitochondrion	75.63	75.25
HORVU6Hr1G076810.1	Barley	plastid	75.88	74.75
TraesCS7A01G238900.1	Wheat	mitochondrion	72.86	74.17
TraesCS7D01G199900.1	Wheat	golgi	72.86	73.6
Zm00001d044748_P002	Maize	mitochondrion	71.61	72.7
EER88157	Sorghum	mitochondrion	71.86	72.41
TraesCS7B01G103800.2	Wheat	mitochondrion	64.82	71.27
Os06t0246500-01	Rice	plastid	70.85	70.85
CDY55062	Canola	cytosol	33.17	70.21
Bra017890.1-P	Field mustard	cytosol	15.83	70.0
KRG95283	Soybean	cytosol, mitochondrion, plastid	27.89	67.68
Zm00001d014514_P001	Maize	cytosol, mitochondrion, plastid	23.12	67.15
CDY14675	Canola	cytosol	70.85	64.09
CDY55064	Canola	plasma membrane	51.76	62.8
HORVU7Hr1G040460.4	Barley	mitochondrion	72.61	57.46
VIT_15s0048g02580.t01	Wine grape	plastid	34.92	32.1
VIT_04s0044g01490.t01	Wine grape	mitochondrion	28.64	23.7
VIT_18s0001g14980.t01	Wine grape	plastid	25.38	21.44
Solyc04g025710.1.1	Tomato	cytosol	5.03	18.52
Os02t0739700-01	Rice	plastid	2.76	2.49

Protein Annotations

KEGG:00010+1.2.4.1	KEGG:00020+1.2.4.1	KEGG:00620+1.2.4.1	EntrezGene:100263880	wikigene:100263880	MapMan:2.2.1.1.1
Gene3D:3.40.50.970	ProteinID:CCB56619	ProteinID:CCB56619.1	InterPro:DH_E1	UniProt:F6HPJ1	EMBL:FN596002
GO:GO:0003674	GO:GO:0003824	GO:GO:0004739	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0006086	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016491
GO:GO:0016624	GO:GO:0043231	GO:GO:0055114	EntrezGene:LOC100263880	wikigene:LOC100263880	PFAM:PF00676
PANTHER:PTHR11516	PANTHER:PTHR11516:SF38	InterPro:Pyrv_DH_E1_asu_subgrp-y	SUPFAM:SSF52518	TIGR:TC66996	InterPro:THDP-binding
TIGRFAMs:TIGR03182	UniParc:UPI00015CAF54	ArrayExpress:VIT_01s0026g00990	EnsemblPlantsGene:VIT_01s0026g00990	EnsemblPlants:VIT_01s0026g00990.t01	unigene:Vvi.7341
RefSeq:XP_002271234	RefSeq:XP_002271234.1	:	:	:	:

Description

Pyruvate dehydrogenase E1 component subunit alpha [Source:UniProtKB/TrEMBL;Acc:F6HPJ1]

Coordinates

chr1:-:9913381..9925151

Molecular Weight (calculated)

43704.4 Da

IEP (calculated)

7.562

GRAVY (calculated)

-0.286

Length

398 amino acids

Sequence
(BLAST)

001: MALSTSFRSN LIKPLTALTA LSSTQHLRRP FSSSADDSTV LTIETSVPFV GHKCEPPSRN VETTPKELLG FFHDMALMRR MEIASDSLYK SKLIRGFCHL
101: YDGQEAVAVG MEAAITKKDC IITAYRDHCI YLGRGGTLVE CFSELMGRQA GSSKGKGGSM HFYKKDSGFY GGHGIVGAQV PLGCGLAFAQ KYSKDETVTF
201: AMYGDGAANQ GQLFEALNIA ALLDLPAILV CENNHYGMGT AEWRAAKSPA YYKRGDYVPG LKVDGMDALA VKQACRFAKE HALKNGPIIL EMDTYRYHGH
301: SMSDPGSTYR TRDEISGVRQ ERDPIERIRK LILSHELSTE AELKSIEKKI RSEVDDAIAQ AKESSMPEPS ELFTNVYVKG FGIEVAGADR KEVRGVLP

Best Arabidopsis Sequence Match ( AT1G59900.1 )
(BLAST)

001: MALSRLSSRS NIITRPFSAA FSRLISTDTT PITIETSLPF TAHLCDPPSR SVESSSQELL DFFRTMALMR RMEIAADSLY KAKLIRGFCH LYDGQEAVAI
101: GMEAAITKKD AIITAYRDHC IFLGRGGSLH EVFSELMGRQ AGCSKGKGGS MHFYKKESSF YGGHGIVGAQ VPLGCGIAFA QKYNKEEAVT FALYGDGAAN
201: QGQLFEALNI SALWDLPAIL VCENNHYGMG TAEWRAAKSP SYYKRGDYVP GLKVDGMDAF AVKQACKFAK QHALEKGPII LEMDTYRYHG HSMSDPGSTY
301: RTRDEISGVR QERDPIERIK KLVLSHDLAT EKELKDMEKE IRKEVDDAIA KAKDCPMPEP SELFTNVYVK GFGTESFGPD RKEVKASLP

Arabidopsis Description

E1 ALPHAPyruvate dehydrogenase E1 component subunit alpha-1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P52901]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.