CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 1
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, secretory
BaCelLo:	secretory
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX90227	Canola	cytosol, mitochondrion, peroxisome	47.5	10.22
CDY26291	Canola	plastid	47.5	6.03
Zm00001d000227_P001	Maize	cytosol	45.0	5.64
Os03t0645100-01	Rice	plastid	45.0	5.5
CDY51472	Canola	plastid	47.5	5.21
CDY63670	Canola	plastid	47.5	4.71
Zm00001d033225_P002	Maize	plastid	45.0	4.7
AT2G34590.1	Thale cress	plastid	47.5	4.68
EER93752	Sorghum	plastid	45.0	4.65
Os12t0616900-01	Rice	plastid	45.0	4.6
VIT_10s0003g03770.t01	Wine grape	plastid	45.0	4.6
TraesCS5A01G374500.1	Wheat	plastid	45.0	4.58
TraesCS5B01G376400.1	Wheat	plastid	45.0	4.58
TraesCS5D01G384100.1	Wheat	golgi	45.0	4.58
EES16391	Sorghum	plastid	45.0	4.51
KRH05520	Soybean	plastid	45.0	4.47
KRH58644	Soybean	nucleus	45.0	4.44
KRH15497	Soybean	plastid	45.0	4.44
KRH42550	Soybean	plastid	45.0	4.43
Solyc04g008590.2.1	Tomato	plastid	45.0	4.41
Solyc08g016750.2.1	Tomato	plastid	45.0	4.41
PGSC0003DMT400019358	Potato	plastid	45.0	4.32
PGSC0003DMT400080554	Potato	plastid	45.0	4.13
TraesCS5A01G030800.1	Wheat	plastid	40.0	4.09
TraesCS5B01G030400.1	Wheat	plastid	40.0	4.07
HORVU0Hr1G009910.2	Barley	plastid	40.0	4.06
TraesCS5D01G039000.1	Wheat	plastid	40.0	3.95
HORVU5Hr1G092920.4	Barley	plastid	45.0	3.87
CDY45814	Canola	mitochondrion	20.0	2.18
CDY05827	Canola	mitochondrion	17.5	1.92
CDX71636	Canola	mitochondrion	17.5	1.92
CDY16348	Canola	mitochondrion	17.5	1.91
CDX91560	Canola	mitochondrion	17.5	1.91
CDX84881	Canola	mitochondrion	17.5	1.91
CDY10556	Canola	mitochondrion	12.5	1.38
CDY02436	Canola	mitochondrion	12.5	1.28
GSMUA_Achr4P31470_001	Banana	mitochondrion	2.5	0.38
GSMUA_Achr5P02560_001	Banana	plastid	0.0	0.0
GSMUA_Achr2P12960_001	Banana	vacuole	0.0	0.0
CDY54117	Canola	cytosol	0.0	0.0
CDY54115	Canola	mitochondrion, peroxisome, plastid	0.0	0.0
CDX90228	Canola	plastid	0.0	0.0

Protein Annotations

EnsemblPlants:CDY54116	EnsemblPlantsGene:GSBRNA2T00013397001	PANTHER:PTHR11624	PANTHER:PTHR11624:SF95	ProteinID:CDY54116	ProteinID:CDY54116.1
UniParc:UPI0004EF2D64	UniProt:A0A078IVU9	MapMan:35.2	:	:	:

Description

BnaC04g53950DPyruvate dehydrogenase E1 component subunit beta [Source:UniProtKB/TrEMBL;Acc:A0A078IVU9]

Coordinates

chrLK033279:-:66702..66877

Molecular Weight (calculated)

4553.5 Da

IEP (calculated)

9.208

GRAVY (calculated)

-0.325

Length

40 amino acids

Sequence
(BLAST)

1: MVRPGEHITI LTYSRMRIHV YHQVPCNAGA KTLVNNGYDP

Best Arabidopsis Sequence Match ( AT2G34590.1 )
(BLAST)

001: MSAILQGAGA ATALSPFNSI DSNKLVAPSR SSLSVRSKRY IVAGSDSKSF GSSLVARRSE PLIPNAVTTK ADTAASSTSS KPGHELLLFE ALQEGLEEEM
101: DRDPHVCVMG EDVGHYGGSY KVTKGLADKF GDLRVLDTPI CENAFTGMGI GAAMTGLRPV IEGMNMGFLL LAFNQISNNC GMLHYTSGGQ FTIPVVIRGP
201: GGVGRQLGAE HSQRLESYFQ SIPGIQMVAC STPYNAKGLM KAAIRSENPV ILFEHVLLYN LKESIPDEEY ICNLEEAEMV RPGEHITILT YSRMRYHVMQ
301: AAKTLVNKGY DPEVIDIRSL KPFDLYTIGN SVKKTHRVLI VEECMRTGGI GASLTAAINE NFHDYLDAPV MCLSSQDVPT PYAGTLEEWT VVQPAQIVTA
401: VEQLCQ

Arabidopsis Description

E1-BETA-2Pyruvate dehydrogenase E1 component subunit beta-3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O64688]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.