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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 9
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY54115 Canola mitochondrion, peroxisome, plastid 13.79 91.8
Zm00001d000227_P001 Maize cytosol 70.2 89.34
Os03t0645100-01 Rice plastid 70.2 87.16
AT1G30120.1 Thale cress plastid 81.03 81.03
VIT_10s0003g03770.t01 Wine grape plastid 77.59 80.56
KRH42550 Soybean plastid 80.54 80.54
Solyc08g016750.2.1 Tomato plastid 80.79 80.39
Solyc04g008590.2.1 Tomato plastid 80.79 80.39
PGSC0003DMT400019358 Potato plastid 81.03 78.9
KRH58644 Soybean nucleus 78.08 78.27
KRH15497 Soybean plastid 78.08 78.27
Zm00001d033225_P002 Maize plastid 73.65 78.07
KRH05520 Soybean plastid 77.09 77.67
CDY54117 Canola cytosol 22.17 77.59
EER93752 Sorghum plastid 72.66 76.23
GSMUA_Achr5P02560_001 Banana plastid 69.21 75.74
Os12t0616900-01 Rice plastid 72.66 75.45
TraesCS5A01G374500.1 Wheat plastid 71.92 74.3
TraesCS5B01G376400.1 Wheat plastid 71.67 74.05
TraesCS5D01G384100.1 Wheat golgi 71.67 74.05
EES16391 Sorghum plastid 72.66 73.93
TraesCS5A01G030800.1 Wheat plastid 70.44 73.15
TraesCS5B01G030400.1 Wheat plastid 70.2 72.52
PGSC0003DMT400080554 Potato plastid 77.83 72.48
HORVU0Hr1G009910.2 Barley plastid 70.2 72.33
GSMUA_Achr2P12960_001 Banana vacuole 10.84 70.97
TraesCS5D01G039000.1 Wheat plastid 69.95 70.12
GSMUA_Achr4P31470_001 Banana mitochondrion 45.07 70.11
HORVU5Hr1G092920.4 Barley plastid 72.41 63.23
CDY54116 Canola cytosol 4.68 47.5
AT5G50850.1 Thale cress mitochondrion 34.48 38.57
AT1G55510.1 Thale cress mitochondrion 28.33 32.67
AT3G13450.1 Thale cress mitochondrion 27.83 31.56
Protein Annotations
Gene3D:3.40.50.920Gene3D:3.40.50.970MapMan:5.1.2.2.1.2EntrezGene:818024UniProt:A0A178W125ProteinID:AAC26685.1
ProteinID:AEC08996.1EMBL:AF167983ArrayExpress:AT2G34590EnsemblPlantsGene:AT2G34590RefSeq:AT2G34590TAIR:AT2G34590
RefSeq:AT2G34590-TAIR-GEnsemblPlants:AT2G34590.1TAIR:AT2G34590.1EMBL:AY087792EMBL:BT025968GO:GO:0000003
GO:GO:0003674GO:GO:0003824GO:GO:0004739GO:GO:0005488GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005737GO:GO:0005975GO:GO:0006091GO:GO:0006096GO:GO:0006139
GO:GO:0008150GO:GO:0008152GO:GO:0008270GO:GO:0009056GO:GO:0009058GO:GO:0009507
GO:GO:0009536GO:GO:0009856GO:GO:0009941GO:GO:0009987GO:GO:0016491GO:GO:0048868
GO:GO:0055114InterPro:IPR009014RefSeq:NP_181006.1UniProt:O64688ProteinID:OAP11401.1PFAM:PF02779
PFAM:PF02780PO:PO:0000013PO:PO:0000037PO:PO:0000230PO:PO:0000293PO:PO:0001054
PO:PO:0001078PO:PO:0001081PO:PO:0001170PO:PO:0001185PO:PO:0004507PO:PO:0007064
PO:PO:0007095PO:PO:0007098PO:PO:0007103PO:PO:0007115PO:PO:0007123PO:PO:0007611
PO:PO:0007616PO:PO:0008019PO:PO:0009005PO:PO:0009006PO:PO:0009009PO:PO:0009010
PO:PO:0009025PO:PO:0009029PO:PO:0009030PO:PO:0009031PO:PO:0009032PO:PO:0009046
PO:PO:0009047PO:PO:0009052PO:PO:0020030PO:PO:0020038PO:PO:0020100PO:PO:0020137
PO:PO:0025022PO:PO:0025281PANTHER:PTHR11624PANTHER:PTHR11624:SF95SMART:SM00861SUPFAM:SSF52518
SUPFAM:SSF52922InterPro:THDP-bindingInterPro:Transketo_C/PFOR_IIInterPro:Transketolase-like_Pyr-bdInterPro:Transketolase_CUniParc:UPI00000A3AE5
SEG:seg:::::
Description
E1-BETA-2Pyruvate dehydrogenase E1 component subunit beta-3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O64688]
Coordinates
chr2:-:14568802..14571143
Molecular Weight (calculated)
44017.9 Da
IEP (calculated)
5.610
GRAVY (calculated)
-0.059
Length
406 amino acids
Sequence
(BLAST)
001: MSAILQGAGA ATALSPFNSI DSNKLVAPSR SSLSVRSKRY IVAGSDSKSF GSSLVARRSE PLIPNAVTTK ADTAASSTSS KPGHELLLFE ALQEGLEEEM
101: DRDPHVCVMG EDVGHYGGSY KVTKGLADKF GDLRVLDTPI CENAFTGMGI GAAMTGLRPV IEGMNMGFLL LAFNQISNNC GMLHYTSGGQ FTIPVVIRGP
201: GGVGRQLGAE HSQRLESYFQ SIPGIQMVAC STPYNAKGLM KAAIRSENPV ILFEHVLLYN LKESIPDEEY ICNLEEAEMV RPGEHITILT YSRMRYHVMQ
301: AAKTLVNKGY DPEVIDIRSL KPFDLYTIGN SVKKTHRVLI VEECMRTGGI GASLTAAINE NFHDYLDAPV MCLSSQDVPT PYAGTLEEWT VVQPAQIVTA
401: VEQLCQ
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.