Factsheet for HORVU7Hr1G052520.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
TargetP:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU0Hr1G018470.1
HORVU0Hr1G025410.1
HORVU1Hr1G008160.1
HORVU2Hr1G056160.5
HORVU2Hr1G067660.1
HORVU2Hr1G112000.1
HORVU3Hr1G021300.1
HORVU3Hr1G054660.1
HORVU3Hr1G113750.1
HORVU4Hr1G047410.2
HORVU4Hr1G048730.1
HORVU6Hr1G023630.1
HORVU7Hr1G078010.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G51560.1	HORVU0Hr1G018470.1	AT1G22920.1	21798944
AT1G51560.1	HORVU0Hr1G025410.1	AT1G22920.1	21798944
AT1G51560.1	HORVU1Hr1G008160.1	AT1G22920.1	21798944
AT1G51560.1	HORVU2Hr1G056160.5	AT1G22920.1	21798944
AT1G51560.1	HORVU2Hr1G067660.1	AT1G22920.1	21798944
AT1G51560.1	HORVU2Hr1G112000.1	AT1G22920.1	21798944
AT1G51560.1	HORVU3Hr1G021300.1	AT1G22920.1	21798944
AT1G51560.1	HORVU3Hr1G054660.1	AT1G22920.1	21798944
AT1G51560.1	HORVU3Hr1G113750.1	AT1G22920.1	21798944
AT1G51560.1	HORVU4Hr1G047410.2	AT1G22920.1	21798944
AT1G51560.1	HORVU4Hr1G048730.1	AT1G22920.1	21798944
AT1G51560.1	HORVU6Hr1G023630.1	AT1G22920.1	21798944
AT1G51560.1	HORVU7Hr1G078010.1	AT1G22920.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G150400.1	Wheat	plastid	72.54	80.67
TraesCS7A01G254200.1	Wheat	nucleus, plastid	72.54	80.67
TraesCS7D01G252700.2	Wheat	plastid	72.29	80.39
Os08t0517500-01	Rice	plastid	73.05	78.17
Zm00001d031540_P002	Maize	plastid	65.74	71.9
KXG25584	Sorghum	plastid	65.74	71.9
CDY11726	Canola	cytosol	24.43	66.9
KRH47293	Soybean	nucleus	59.19	61.68
PGSC0003DMT400068172	Potato	cytosol, mitochondrion, peroxisome	20.91	61.03
KRH44611	Soybean	nucleus	58.69	60.36
VIT_09s0054g00600.t01	Wine grape	plastid	59.19	59.34
AT1G51560.1	Thale cress	plastid	57.93	58.67
CDX82215	Canola	plastid	56.17	58.38
Bra001814.1-P	Field mustard	plastid	55.92	58.12
Bra031254.1-P	Field mustard	plastid	57.43	57.72
AT3G21140.1	Thale cress	plastid	56.17	57.62
CDY50076	Canola	plastid	56.68	57.54
Solyc06g063290.2.1	Tomato	plastid	58.69	57.53
CDY37313	Canola	plastid	55.16	57.48
CDY19583	Canola	plastid	57.18	57.32
PGSC0003DMT400068174	Potato	plastid	58.44	57.28
Bra030435.1-P	Field mustard	plastid	56.42	57.0
Bra023902.1-P	Field mustard	plastid	55.92	56.92
CDY32407	Canola	plastid	54.41	56.84
CDX87825	Canola	plastid	56.17	56.6
CDY27539	Canola	plastid	55.92	56.49
CDY43915	Canola	plastid	55.67	56.23
GSMUA_AchrUn_...	Banana	plastid	55.92	55.36
GSMUA_Achr7P04940_001	Banana	plastid	52.14	52.67
HORVU2Hr1G037680.2	Barley	cytosol	14.11	21.46

Protein Annotations

EnsemblPlants:HORVU7Hr1G052520.1	EnsemblPlantsGene:HORVU7Hr1G052520	Gene3D:2.30.110.10	Gene3D:3.20.180.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0048037	InterPro:Haem_oxidase_HugZ-like_sf	InterPro:IPR012349	InterPro:IPR037119	InterPro:Split_barrel_FMN-bd	PANTHER:PTHR13343
PANTHER:PTHR13343:SF16	PFAM:PF13883	SEG:seg	SUPFAM:SSF50475	UniParc:UPI000B4788F3	UniProt:A0A287WHS5
MapMan:35.2	:	:	:	:	:

Description

No Description!

Coordinates

chrchr7H:-:200511571..200514784

Molecular Weight (calculated)

42705.8 Da

IEP (calculated)

9.759

GRAVY (calculated)

-0.258

Length

397 amino acids

Sequence
(BLAST)

001: SAPQLSLSSP PRVCPSFLSP SLSPPRALPH SPPIRLMEAL AGAAAAASSA LLPSFPAHQS HSRVALRARP CGPLRAASAG GGGGKDDAAK PNGTPVVKSK
101: VDPSQNGALG PVTTEKSRTT SSTNTTPDSS GSRAGLFRTP ISGGVQSATF AHGLPPPALA VRNLMEQARF AHLCTVMSGM HHRRAGYPFG SLVDFANDSM
201: GHPIFSLSPL AIHTRNLLSD PRCTLVVQVP GWSGLSNARV TIFGDVYPLP AEQQEWAHKQ YVAKHQQWAS QQWGNFYYYR MQNISDIYFI GGFGTVAWVD
301: VKQYETIQPD KIAVDGGEQS LKELNAIFSK PLREFMSAEG EVDDAALISV DSKGIDIRVR QGAQFNIQRL AFDVPYKVET LEEAKRALHK IIKTSSK

Best Arabidopsis Sequence Match ( AT1G51560.1 )
(BLAST)

001: MDAAIFTSVY VCNIPKTKKA FFNPNPPALS SSSCWLCNSQ AKQIIKLRIR EGSNQGLLRV HALFNNEEAS SESEDKNGFG LLPADIFSLP QEKFGSNVSG
101: EKDSENIIDV ETSLAVPHGG GTRAGLFRTP ISGGVQSATS AHGLPRPALA VRNLMEQARF AHLCTVMSKM HHRREGYPFG SLVDFAPDPM GHPIFSFSPL
201: AIHTRNILAE PRCTLVVQIP GWSCLSNARV TLFGDVYPLP EEQQEWAHKQ YMLKHHQGPS QQWGNFHYFR MQNISDIYFI GGFGTVAWIN VNEYETLQPD
301: KIAVDGGEQN LKELNAIFSK PLRELLSSEA ELDDAAIISI DSKGIDIRVR QGAQFKIQRL AFEESHGVET LEEAKSALWK VIEKGKLHNL QK

Arabidopsis Description

Pyridoxamine 5'-phosphate oxidase family protein [Source:UniProtKB/TrEMBL;Acc:Q9C8K8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.