Factsheet for Zm00001d031540_P002

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG25584	Sorghum	plastid	87.33	87.33
TraesCS7A01G254200.1	Wheat	nucleus, plastid	75.76	77.03
TraesCS7B01G150400.1	Wheat	plastid	75.76	77.03
TraesCS7D01G252700.2	Wheat	plastid	75.21	76.47
Os08t0517500-01	Rice	plastid	74.1	72.51
HORVU7Hr1G052520.1	Barley	plastid	71.9	65.74
Zm00001d015274_P001	Maize	plastid	66.12	60.45
GSMUA_AchrUn_...	Banana	plastid	60.88	55.11
Zm00001d037710_P001	Maize	cytosol	18.18	51.97
GSMUA_Achr7P04940_001	Banana	plastid	54.82	50.64
Zm00001d021881_P001	Maize	plastid	15.43	19.65

Protein Annotations

EnsemblPlants:Zm00001d031540_P002	EnsemblPlants:Zm00001d031540_T002	EnsemblPlantsGene:Zm00001d031540	EntrezGene:100193760	Gene3D:2.30.110.10	Gene3D:3.20.180.10
GO:GO:0003674	GO:GO:0005488	GO:GO:0048037	InterPro:Haem_oxidase_HugZ-like_sf	InterPro:IPR012349	InterPro:IPR037119
InterPro:Split_barrel_FMN-bd	ncoils:Coil	PANTHER:PTHR13343	PANTHER:PTHR13343:SF16	PFAM:PF13883	ProteinID:ONM03100.1
SEG:seg	SUPFAM:SSF50475	UniParc:UPI0002214379	UniProt:A0A1D6KJI5	MapMan:35.2	:

Description

Pyridoxamine 5'-phosphate oxidase family protein

Coordinates

chr1:+:193698637..193701522

Molecular Weight (calculated)

39285.7 Da

IEP (calculated)

9.045

GRAVY (calculated)

-0.226

Length

363 amino acids

Sequence
(BLAST)

001: MEALAGAASS SVLPARHPPS RVAAQSLALR PSRCGPLRAV SAGGVSGKDD AHAANGSPVL KQLNSDSSLN GVLPIAADKS QKASSTNVST DSSGSRAGLF
101: RTPISGGVQS ATFAHGLPPP ALAVRNLMEQ ARFAHLCSVM SGMHHRRTGY PFGSLVDFAN DSMGHPIFSL SPLAIHTRNL LADPRCTLVV QVPGWSGLSN
201: ARVTIFGDVY PLPAEQQEWA HKQYVAKHQQ WASQQWGNFY YYRMHNISDI YFIGGFGTVA WIDVKEYETI QPDKIAVDGG DLQSLKELNA IFSKPLREVL
301: SSEGEVDDAA LISVDSKGID IRVRQGAQFN IQRLAFDVPH KVETLEEAKK ALHKIIKDKQ QIK

Best Arabidopsis Sequence Match ( AT1G51560.1 )
(BLAST)

001: MDAAIFTSVY VCNIPKTKKA FFNPNPPALS SSSCWLCNSQ AKQIIKLRIR EGSNQGLLRV HALFNNEEAS SESEDKNGFG LLPADIFSLP QEKFGSNVSG
101: EKDSENIIDV ETSLAVPHGG GTRAGLFRTP ISGGVQSATS AHGLPRPALA VRNLMEQARF AHLCTVMSKM HHRREGYPFG SLVDFAPDPM GHPIFSFSPL
201: AIHTRNILAE PRCTLVVQIP GWSCLSNARV TLFGDVYPLP EEQQEWAHKQ YMLKHHQGPS QQWGNFHYFR MQNISDIYFI GGFGTVAWIN VNEYETLQPD
301: KIAVDGGEQN LKELNAIFSK PLRELLSSEA ELDDAAIISI DSKGIDIRVR QGAQFKIQRL AFEESHGVET LEEAKSALWK VIEKGKLHNL QK

Arabidopsis Description

Pyridoxamine 5'-phosphate oxidase family protein [Source:UniProtKB/TrEMBL;Acc:Q9C8K8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.