Factsheet for Os08t0517500-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os04t0654700-02

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G51560.1	Os04t0654700-02	AT1G22920.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G254200.1	Wheat	nucleus, plastid	78.71	81.79
TraesCS7B01G150400.1	Wheat	plastid	78.71	81.79
TraesCS7D01G252700.2	Wheat	plastid	78.44	81.51
Zm00001d031540_P002	Maize	plastid	72.51	74.1
KXG25584	Sorghum	plastid	72.51	74.1
HORVU7Hr1G052520.1	Barley	plastid	78.17	73.05
CDY11726	Canola	cytosol	27.76	71.03
KRH47293	Soybean	nucleus	64.96	63.25
PGSC0003DMT400068172	Potato	cytosol, mitochondrion, peroxisome	23.18	63.24
VIT_09s0054g00600.t01	Wine grape	plastid	64.69	60.61
CDY37313	Canola	plastid	61.99	60.37
KRH44611	Soybean	nucleus	62.8	60.36
CDY43915	Canola	plastid	63.88	60.31
Os02t0148400-01	Rice	plastid	63.88	60.15
Bra023902.1-P	Field mustard	plastid	63.07	60.0
CDX82215	Canola	plastid	61.73	59.95
CDY50076	Canola	plastid	63.07	59.85
Bra030435.1-P	Field mustard	plastid	63.34	59.8
CDY32407	Canola	plastid	61.19	59.74
Bra001814.1-P	Field mustard	plastid	61.46	59.69
CDX87825	Canola	plastid	63.34	59.64
AT1G51560.1	Thale cress	plastid	62.8	59.44
AT3G21140.1	Thale cress	plastid	61.99	59.43
CDY27539	Canola	plastid	62.8	59.29
Bra031254.1-P	Field mustard	plastid	62.53	58.73
CDY19583	Canola	plastid	62.53	58.59
Solyc06g063290.2.1	Tomato	plastid	63.61	58.27
PGSC0003DMT400068174	Potato	plastid	63.34	58.02
GSMUA_AchrUn_...	Banana	plastid	60.38	55.86
GSMUA_Achr7P04940_001	Banana	plastid	56.87	53.69
Os07t0573800-02	Rice	plastid	18.6	20.18

Protein Annotations

Gene3D:2.30.110.10	Gene3D:3.20.180.10	MapMan:35.2	EntrezGene:4346040	EMBL:AK065593	ProteinID:BAD09974.1
ProteinID:BAF24157.1	ProteinID:BAT06252.1	ProteinID:EEE68997.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0048037
InterPro:Haem_oxidase_HugZ-like_sf	InterPro:IPR012349	InterPro:IPR037119	EnsemblPlantsGene:Os08g0517500	EnsemblPlants:Os08t0517500-01	PFAM:PF13883
PANTHER:PTHR13343	PANTHER:PTHR13343:SF16	UniProt:Q7EZB9	SUPFAM:SSF50475	InterPro:Split_barrel_FMN-bd	UniParc:UPI000023AFA0
RefSeq:XP_015650638.1	SEG:seg	:	:	:	:

Description

FMN-binding split barrel domain containing protein. (Os08t0517500-01)

Coordinates

chr8:-:25683618..25686522

Molecular Weight (calculated)

39927.3 Da

IEP (calculated)

8.859

GRAVY (calculated)

-0.293

Length

371 amino acids

Sequence
(BLAST)

001: MEALAGTAAA SLPALPSHQP RSRLAPRSLA LPGGRSCCGP LRAAAAGGGG GAKDDAQAGV TPNGSPVIKP KSDSALSSQN GVLGSTKTDK PHTTLSTHTT
101: TDSSGSRAGL FRTPISGGVQ SATFAHGLPP PALAVRNLME QARFAHLCTV MSGMHHRRTG YPFGSLVDFS NDSMGHPIFS LSPLAIHTRN LLSDPRCTLV
201: VQVPGWSGLS NARVTIFGDV YPLPEDQQEW AHKQYVAKHQ QWASQQWGNF YYYRMQNISD IYFIGGFGTV AWVDVKEYEA IQPDKIAVDG GEQSLKELNA
301: IFSKPLREFL SSEGEVDDAA LISVDSKGID IRVRQGAQFN IQRLAFDVPH KVETLEEAKR ALHKIIKTTS K

Best Arabidopsis Sequence Match ( AT1G51560.1 )
(BLAST)

001: MDAAIFTSVY VCNIPKTKKA FFNPNPPALS SSSCWLCNSQ AKQIIKLRIR EGSNQGLLRV HALFNNEEAS SESEDKNGFG LLPADIFSLP QEKFGSNVSG
101: EKDSENIIDV ETSLAVPHGG GTRAGLFRTP ISGGVQSATS AHGLPRPALA VRNLMEQARF AHLCTVMSKM HHRREGYPFG SLVDFAPDPM GHPIFSFSPL
201: AIHTRNILAE PRCTLVVQIP GWSCLSNARV TLFGDVYPLP EEQQEWAHKQ YMLKHHQGPS QQWGNFHYFR MQNISDIYFI GGFGTVAWIN VNEYETLQPD
301: KIAVDGGEQN LKELNAIFSK PLRELLSSEA ELDDAAIISI DSKGIDIRVR QGAQFKIQRL AFEESHGVET LEEAKSALWK VIEKGKLHNL QK

Arabidopsis Description

Pyridoxamine 5'-phosphate oxidase family protein [Source:UniProtKB/TrEMBL;Acc:Q9C8K8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.