CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra023902.1-P	Field mustard	plastid	98.69	96.41
CDY27539	Canola	plastid	95.8	92.88
CDY11726	Canola	cytosol	30.71	80.69
CDY50076	Canola	plastid	81.1	79.03
CDY32407	Canola	plastid	77.69	77.89
CDY19583	Canola	plastid	80.05	77.02
CDX82215	Canola	plastid	76.9	76.7
PGSC0003DMT400068172	Potato	cytosol, mitochondrion, peroxisome	25.98	72.79
AT3G21140.1	Thale cress	plastid	72.97	71.83
CDY43915	Canola	plastid	69.82	67.68
CDX87825	Canola	plastid	69.55	67.26
VIT_09s0054g00600.t01	Wine grape	plastid	66.4	63.89
KRH47293	Soybean	nucleus	63.78	63.78
TraesCS7B01G150400.1	Wheat	plastid	58.53	62.47
TraesCS7A01G254200.1	Wheat	nucleus, plastid	58.53	62.47
KRH44611	Soybean	nucleus	63.25	62.44
TraesCS7D01G252700.2	Wheat	plastid	58.27	62.18
Os08t0517500-01	Rice	plastid	60.37	61.99
Solyc06g063290.2.1	Tomato	plastid	64.04	60.25
PGSC0003DMT400068174	Potato	plastid	63.52	59.75
GSMUA_Achr7P19630_001	Banana	plastid	59.84	56.72
HORVU7Hr1G052520.1	Barley	plastid	57.48	55.16
Os02t0148400-01	Rice	plastid	56.17	54.31
GSMUA_AchrUn_...	Banana	plastid	55.91	53.12
Zm00001d037710_P001	Maize	cytosol	17.59	52.76
GSMUA_Achr7P04940_001	Banana	plastid	50.92	49.36
KXG25583	Sorghum	cytosol, mitochondrion	13.39	48.57
CDY50859	Canola	plastid	19.68	23.36
CDY64899	Canola	plastid	19.68	23.29

Protein Annotations

EnsemblPlants:CDY37313	EnsemblPlantsGene:GSBRNA2T00063836001	Gene3D:2.30.110.10	Gene3D:3.20.180.10	GO:A0A078HKC4	GO:GO:0003674
GO:GO:0005488	GO:GO:0048037	InterPro:Haem_oxidase_HugZ-like_sf	InterPro:IPR012349	InterPro:IPR037119	InterPro:Split_barrel_FMN-bd
PANTHER:PTHR13343	PANTHER:PTHR13343:SF16	PFAM:PF13883	ProteinID:CDY37313	ProteinID:CDY37313.1	SEG:seg
SUPFAM:SSF50475	UniParc:UPI0004EEB816	UniPathway:UPA00647	UniProt:A0A078HKC4	MapMan:35.2	:

Description

BnaA01g25330DBnaA01g25330D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HKC4]

Coordinates

chrLK032397:+:280616..282833

Molecular Weight (calculated)

42152.1 Da

IEP (calculated)

6.557

GRAVY (calculated)

-0.237

Length

381 amino acids

Sequence
(BLAST)

001: MSMEALSTSS HISNLPQIKP LLKSSLPSSQ SPCWLCNPRI PNLRISDGSS HVGLRIQALS HNNDTPSDEG DIFSLSQEKI ETLLSHSSVM IDVQTSLALP
101: QGCAAGNSGG NRAVLYRTPI SGGVQNATSA HALPPPALAV RNLLEQARFA HLCTVMSKMH HRREGYPFGS LVDFASDRMG HPIFLFSPLA IHTRNLLAEP
201: RCSLVVQIPG WSGLSNARVT LFGDVYPLSE DEQEWAHKQY SAKHHHGPSE QWVNFHYFRM HNISDIYFIG GFGTVAWVDV KEYEALQPDK IAVDGGEQNL
301: KELNAIFSKP LRELLSIESE VDDAALISID SKGIDVRVRQ GAQFNIQRLA FEEGHGVETL EEAKAALWKV MENVKLNYLQ K

Best Arabidopsis Sequence Match ( AT3G21140.1 )
(BLAST)

001: MEALFTSTHT PNLQTKPLLK SPLPTSSQSS CWFCNSLPKT QFPKLRLSNG SSHGLRIQAL LRNETPSEGE DNNGFGFFPG DIFSLSQEKL GSNSNGETSH
101: SVIDVEASLA HPQGGGGNRA GLFRTPISGG VQNATSAHAL PRPALAVRNL LEQARFAHLC TVMSKMHHRR EGYPFGSLVD FAPDRMGHPI FLFSPLAIHT
201: RNLLNEPRCS LVVQIPGWSG LSNARVTLFG DVYPLSEDEQ EWAHKQYIAK HPHGPSEQWG NFHYFRMQNI SDIYFIGGFG TVAWVDVKEY EGLQPDKIAV
301: DGGERNLKEL NAIFSKPLRE LLSTESEVDD AALISIDSKG IDVRVRQGAQ FNIQRLAFEE GHGVETLEEA KSALWKVLEK VKLNLQK

Arabidopsis Description

Pyridoxamine 5'-phosphate oxidase family protein [Source:UniProtKB/TrEMBL;Acc:Q8L637]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.