CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra031966.1-P	Field mustard	plastid	94.39	94.39
CDY64899	Canola	plastid	90.97	90.68
AT3G03890.1	Thale cress	plastid	84.74	84.74
VIT_08s0007g07350.t01	Wine grape	cytosol	62.93	73.19
HORVU2Hr1G037680.2	Barley	cytosol	53.27	65.52
KRG94835	Soybean	mitochondrion	64.17	63.19
KRH06700	Soybean	mitochondrion	62.93	61.96
GSMUA_Achr5P14810_001	Banana	plastid	63.24	60.96
PGSC0003DMT400083485	Potato	mitochondrion, plastid	59.81	59.81
Solyc03g063240.2.1	Tomato	plastid	59.5	59.5
EER99589	Sorghum	plastid	56.7	53.22
Os07t0573800-02	Rice	plastid	56.7	53.22
TraesCS2A01G184900.1	Wheat	unclear	54.83	51.61
TraesCS2D01G202700.1	Wheat	plastid	54.83	51.31
TraesCS2B01G222400.2	Wheat	plastid	54.52	51.02
Zm00001d021881_P001	Maize	plastid	44.86	50.53
CDY11726	Canola	cytosol	10.28	22.76
CDY50076	Canola	plastid	24.3	19.95
CDX82215	Canola	plastid	23.68	19.9
CDY37313	Canola	plastid	23.36	19.68
CDY27539	Canola	plastid	23.99	19.59
CDY32407	Canola	plastid	23.05	19.47
CDY19583	Canola	plastid	23.99	19.44
CDX87825	Canola	plastid	21.81	17.77
CDY43915	Canola	plastid	21.5	17.56

Protein Annotations

KEGG:00750+1.4.3.5	Gene3D:2.30.110.10	Gene3D:3.20.180.10	MapMan:35.2	GO:A0A078IN67	UniProt:A0A078IN67
EnsemblPlants:CDY50859	ProteinID:CDY50859	ProteinID:CDY50859.1	InterPro:DUF2470	GO:GO:0003674	GO:GO:0005488
GO:GO:0048037	EnsemblPlantsGene:GSBRNA2T00097686001	InterPro:Haem_oxidase_HugZ-like_sf	InterPro:IPR012349	InterPro:IPR037119	PFAM:PF01243
PFAM:PF10615	PANTHER:PTHR13343	PANTHER:PTHR13343:SF4	MetaCyc:PWY-7204	MetaCyc:PWY-7282	InterPro:Pyridox_Oxase_put
SUPFAM:SSF50475	InterPro:Split_barrel_FMN-bd	UniPathway:UPA00647	UniParc:UPI0004EDB67E	SEG:seg	:

Description

BnaA05g37200DBnaA05g37200D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IN67]

Coordinates

chrLK032945:-:9665..12203

Molecular Weight (calculated)

34829.7 Da

IEP (calculated)

8.345

GRAVY (calculated)

-0.044

Length

321 amino acids

Sequence
(BLAST)

001: MKSVVAHFST PLIAGARFFP PTCLIHPQSI STVRRRKFSS SFTVMASAAQ SSSQAVSPGS AETDVFKLIQ AHEAKAARLS PVEEIRTVLN GSVCGMLSTF
101: SQKYEGYPSG SMVDFACDAD GSPILAVSSL AVHTKDLLAN PKCSLLVARD PEDRTGLRIT LHGDAVLVSD KDQAAVRSAY LAKHPNAFWV DFGDFSFMRI
201: EPKVVRFVSG VATAFLGSGE FNKEEYQAAK VDPIAQFAKP VTSHMNKDHE EDTIAIVHHA TSIPVESALM LDLDSLGFNV KATLQGNTFK LRVPFPRRAQ
301: DRKDVKTLIV EMLQAAKSVS N

Best Arabidopsis Sequence Match ( AT3G03890.1 )
(BLAST)

001: MKSLVAHFST PLITARLVPR CIIHRASISA VSFSTVRRRF SPLTMASAAQ SSSQAVSYGS GNSDTDVFKL IQAHEEKAAR LSPVEEIRTV LNGSICGMLS
101: TFSQKYEGYP SGSMVDFACD ADGSPILAVS SLAVHTKDLL ANPKCSLLIA RDPEDRTGLR ITLHGDAVLV SEKDQAAVRS AYLAKHPKAF WVDFGDFSFM
201: RIEPKVVRYV SGVATAFLGS GEFSKEEYQA AKVDPIAQYA KPVTSHMNKD HEEDTKAIVH NITSIPVESA LMLDLDSLGF NVKATLQGNT FKLRVPFPRR
301: AQDRKDVKTL IVEMLQAAKS N

Arabidopsis Description

AT3G03890 protein [Source:UniProtKB/TrEMBL;Acc:Q8LDU1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.